Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq19 122 9e-23 seq20 109 5e-19 >seq19 Length=654644 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||||| | | ||| ||||| | |||||| || || ||||| |||||||| | Sbjct 380993 CCGCCGCGCAGACGCAACACAAGATGCAGCGTCGACTCCTTCTGAATATTGTAATCAGAA 380934 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || || ||||||||||| | || || ||||||||||||||||| Sbjct 380933 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGG 380874 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || ||||| || || ||| || || | ||||| | || || Sbjct 380873 ATACCCTCCTTGTCTTGAATCTTCGCCTTCACGTTGTCGATCGTATCCGATGACTCGACC 380814 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || |||||||| ||||||| || || |||||||| ||||| Sbjct 380813 TCAGGGGTGACGGTCTTCCCGGTCAGCGTCTTGACGAAAATCTGCAT 380767 >seq20 Length=97954 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||| | | | || ||||| | |||||| || || ||||| ||||| || | Sbjct 71997 CCGCCGCGGAGACGCAAGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAA 71938 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || | |||||||| || | ||||| ||||| ||||||||||| Sbjct 71937 AGAGTGCGACCGTCCTCCAATTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAGGG 71878 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || || | ||||| || || || Sbjct 71877 ATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATAGTATCGGAGGACTCGACC 71818 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | ||| | ||||||||||||||| || || ||||| || |||||| Sbjct 71817 TCGAGAGTGATGGTCTTGCCGGTCAACGTCTTAACGAAGATCTGCATT 71770 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| || || |||||||| || | | ||||| |||| Sbjct 71754 AGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCC 71695 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || || || ||||| | ||||| ||||| ||||||||||| || || || || ||| Sbjct 71694 TCCAGTTGTTTACCGGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCT 71635 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || |||||| || | || || || || || || | || | |||| Sbjct 71634 TGGATCTTGGCCTTTACGTTATCGATGGTGTCTGAGGACTCGACCTCGAGGGTGATGGTC 71575 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | || || ||||| || ||||| Sbjct 71574 TTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 71543 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| | | ||| || ||||||| |||||| || || || |||||||| |||| Sbjct 71541 CCACCGCGAAGACGAAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCTGAA 71482 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || |||| || |||||||| || || | ||||| ||||| |||||||||||| Sbjct 71481 AGAGTACGTCCGTCCTCGAGCTGCTTCCCAGCGAAGATGAGACGCTGTTGGTCGGGAGGA 71422 Query 64337 AT 64338 || Sbjct 71421 AT 71420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643763237040