Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq20 113 4e-20 seq19 102 8e-17 seq10 82.4 8e-11 >seq20 Length=97954 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | ||| | | | || ||||| || ||||||||||| Sbjct 71769 CCACCGCGGAGACGGAGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 71710 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||| ||||||||||||| |||| |||||||||||||| ||||| Sbjct 71709 AGAGTGCGGCCGTCCTCCAGTTGTTTACCGGCGAAGATGAGACGCTGTTGGTCGGGAGGG 71650 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || |||| | || | |||||| | ||||| ||| Sbjct 71649 ATGCCCTCCTTGTCTTGGATCTTGGCCTTTACGTTATCGATGGTGTCTGAGGACTCGACC 71590 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || || || || || || || || |||||||| Sbjct 71589 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 71543 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | |||||| || | ||| | | |||||||| ||||| |||||||| Sbjct 71997 CCGCCGCGGAGACGCAAGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAA 71938 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||| | ||| || || | |||| || ||||||||||| ||||| Sbjct 71937 AGAGTGCGACCGTCCTCCAATTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAGGG 71878 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| | || | || | ||| || | || |||| ||||| | Sbjct 71877 ATACCCTCCTTGTC-CTGAATCTTCGCCTTCACGTTG-TCGATAGTATCGGAGGACTCGA 71820 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || || || |||| || || || || |||||||| Sbjct 71819 CCTCGAGAGTGATGGTCTTGCCGGTCAACGTCTTAACGAAGATCTGCAT 71771 >seq19 Length=654644 Score = 102 bits (112), Expect = 8e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| |||| |||||| || | ||| | | |||||||| ||||| ||||| || Sbjct 380993 CCGCCGCGCAGACGCAACACAAGATGCAGCGTCGACTCCTTCTGAATATTGTAATCAGAA 380934 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||||||||| || |||| |||| || ||||| ||||| ||||| Sbjct 380933 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGG 380874 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| | || | || | ||| || | || || | ||||| | Sbjct 380873 ATACCCTCCTTGTC-TTGAATCTTCGCCTTCACGTTG-TCGATCGTATCCGATGACTCGA 380816 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || || ||||| || || || ||||||||||| Sbjct 380815 CCTCAGGGGTGACGGTCTTCCCGGTCAGCGTCTTGACGAAAATCTGCAT 380767 >seq10 Length=1059423 Score = 82.4 bits (90), Expect = 8e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 52649 CGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTT 52708 ||| || || ||| ||| | |||||||||||| || |||||| ||||||| || || Sbjct 591229 CGCTCTCCCCGTCTCGCTCATCGGCATGAACGCGAAGCTCATGTGTCAGTACATTGAATT 591170 Query 52709 TGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATC 52767 ||||| |||||||| | || || |||| | | ||| | ||| | ||| | Sbjct 591169 CGTGGCTGATCGTCTCCTTGTATCCCT-TGGCAACGACAAGGTGTACAATTCGACCAACC 591111 Query 52768 CGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAG 52827 | || || || ||| ||| || ||||| |||||||||| ||||| ||||| ||||| | Sbjct 591110 CCTTCGACTTCATGGACATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAAAAGCGCG 591051 Query 52828 TC 52829 || Sbjct 591050 TC 591049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261370255520