Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq10 114 2e-20 seq88 82.4 9e-11 >seq10 Length=1059423 Score = 114 bits (126), Expect = 2e-20 Identities = 162/225 (72%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 ||||||||||| |||||| || || ||||| ||||| ||||||||||| |||||| Sbjct 591399 CCCTCGTCACGACTGATGAGCTCGTTGGAGAAAGTAAGACCAGGCATGAGACCACGCTTC 591458 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 ||||||||||| || | ||||| || ||||||||||| ||||| ||| ||||| Sbjct 591459 TTCAACCAGAAGATAGAGGCGAATGAACCGGAGAAGAAGATACCCTCGACAGCGGCGAAA 591518 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAA-CCACTTCATCGCCCACTG 127716 |||| |||||||| || || | || | || | ||| ||| | ||||||| Sbjct 591519 GCAACGAGACGCTCAGCGAATG-TCGATTGCTGGTCTGAAATCCATCGAAGGGCCCACTC 591577 Query 127717 TGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAG 127761 ||||| || |||||| |||| | | ||| || |||||||| Sbjct 591578 GGCCTTGCGCTTGATACAAGGGATATTTTCGATGGCATCAAAGAG 591622 >seq88 Length=206745 Score = 82.4 bits (90), Expect = 9e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 12934 CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGG 12993 |||||| ||||||||| || | |||||| || || ||||||||||| || | | Sbjct 161201 CAAAGAGATCTCGCACCCTGGAAGAACCGACGCCAACGAACATCTCCACGAATTCAGAAC 161260 Query 12994 CGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 13053 | || || |||||||||||||| ||| |||||| | || ||||| || || | Sbjct 161261 CAGAGACGGAGAGGAAGGGGACGTTGGCTTCGCCCGCGGTTGCCTTCGCGAGTAGTGTTT 161320 Query 13054 TCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 13106 | || || || ||| || | ||||| ||| || || |||||| | |||||| Sbjct 161321 TACCAGTTCCAGGTGGTCCAGAGAGAATGGCCCCTCGCGGGATCTTCGCACCA 161373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505926972560