Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq10 250 2e-61 seq20 145 8e-30 seq19 102 8e-17 seq8 96.9 3e-15 seq3 86.0 6e-12 >seq10 Length=1059423 Score = 250 bits (276), Expect = 2e-61 Identities = 394/557 (71%), Gaps = 13/557 (2%) Strand=Plus/Plus Query 132891 CAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGT 132950 || |||||| |||||| |||| ||||||||| | ||||| |||||| |||||| Sbjct 591374 CAGGCAAGCGAAGTCGGTGTGCATGCCCTCGTCACGACTGATGAGCTCGTTGGAGAAAGT 591433 Query 132951 CAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAA 133010 | || |||||||| || || || || | ||| || || | |||||| || || || Sbjct 591434 AAGACCAGGCATGAGACCACGCTTCTTCAACCAGAAGATAGAGGCGAATGAACCGGAGAA 591493 Query 133011 GAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCT 133070 ||||| |||||||| || |||||||| || || ||||| |||| || | || | | Sbjct 591494 GAAGATACCCTCGACAGCGGCGAAAGCAACGAGACGCTCAGCGAATGTCGATTGCTGGTC 591553 Query 133071 GGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGC 133130 | ||||| || || ||||| |||||||| |||| || || || |||||||||| Sbjct 591554 TGAAATCCATCGAAGGGCCCACTCGGCCTTGCGCTTGATACAAGGGATATTTTCGATGGC 591613 Query 133131 GTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC----ACGTAGGTGTCGATGAGGGTCG 133186 | ||| | | | ||| | | | || || | | |||||||||||| | | Sbjct 591614 AT-CAA-AGAGGTAGT--CGCGTTCGGCAAAGTCCTTGATGTAGGTGTCGATCAACAGTG 591669 Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246 |||| | || ||||| | ||||||||| || || || ||||| || || || |||| Sbjct 591670 AATAGGTCTCAGAGTGGATGTTCTCCATCATTATCTGGAAACCGTAGAAACAACGAGCCT 591729 Query 133247 CGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306 | | || |||||||| | | |||||||||||| || ||||||||||| ||||| || Sbjct 591730 CAGCAACTTGCACTTCGTTCGAGAAACGCTCGACGAGGTTTTCGTTGACAATGCCATCCG 591789 Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC--G 133364 |||||||| ||||| || ||||| |||||| || |||||| |||||| ||| | Sbjct 591790 AAGCGGCGAAGAAGGCGAGGACGTGAGAGATGAAGTGACGCTCGCCATCGTTC-AGCTTG 591848 Query 133365 CT--CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCC 133422 | |||||| | | || || || ||||||| |||||| | ||||| || || ||| Sbjct 591849 TTTGTCCAGTCATGGATATCTTTAGAAAGGTCCATCTCCTCAGCAGTCCAGAAGGAAGCC 591908 Query 133423 TCGGCTTTTTTGTACAT 133439 |||||||| |||||||| Sbjct 591909 TCGGCTTTCTTGTACAT 591925 Score = 176 bits (194), Expect = 5e-39 Identities = 376/559 (67%), Gaps = 7/559 (1%) Strand=Plus/Minus Query 132886 AACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTG 132945 |||| | |||||| || ||| |||| |||||| || || | ||||| || ||| | Sbjct 593736 AACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGGAG 593677 Query 132946 AAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC 133005 || || | ||| || | | ||||| || |||||||| ||||| | ||||| || Sbjct 593676 AAGGTAAGGCCAGGTAGTAATCCGCGCTTCTTGAGCCAGAATATTGAAGCGAACGATCCA 593617 Query 133006 GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCT 133065 |||||||| | |||||| ||||| ||||| || || ||||| | |||||| | | | Sbjct 593616 GAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTGCAGCGAACGAAGATCGT 593557 Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 ||| | ||||| || || |||||||| ||||||| |||| || || || |||||| Sbjct 593556 TTGTCTTCTATCCATCGAAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATAGTTTCG 593497 Query 133126 ATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTC 133185 ||||| | || | | | || | || | ||||| || ||||| | Sbjct 593496 ATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGCATA 593437 Query 133186 GAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCC 133245 ||||| | ||||| |||| || ||||| ||||| || ||||| || || || || Sbjct 593436 GAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGAGCT 593377 Query 133246 TCGACCACCTGCACTT--CTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGT 133303 || | || || |||| ||||| ||| || || || || || || ||||||||||| | Sbjct 593376 TCTGCGACTTGGACTTCGCTTGA--GAAGCGTTCAACGAGGTTCTCATTGACGATGCCAT 593319 Query 133304 CGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC 133363 || || ||||| ||||| || | | | |||||| || || | |||| | || | Sbjct 593318 CGGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAATC 593259 Query 133364 ---GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACG 133420 | | |||||| | || || || || || | ||| |||||||||||||| || | Sbjct 593258 GAAGATTCCAGTCCATCCAATCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAGAAG 593199 Query 133421 CCTCGGCTTTTTTGTACAT 133439 | | || | |||||||| Sbjct 593198 CTTGCGCCTGCTTGTACAT 593180 >seq20 Length=97954 Score = 145 bits (160), Expect = 8e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| |||| |||||| || | Sbjct 71543 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCA 71602 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| || || ||||||| Sbjct 71603 GACACCATCGATAACG-TAAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCA 71661 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||| || ||||| ||||| |||| ||||| || |||||||| Sbjct 71662 ACAGCGTCTCATCTTCGCCGGTAAACAACTGGAGGACGGCCGCACTCTTTCTGACTACAA 71721 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| |||||| | || || ||| | || || ||| Sbjct 71722 CATCCAGAAGGAATCCACCCTCCATCTCGTTCTCCGT 71758 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || ||| | || ||||| |||||||| |||| |||||| || | Sbjct 71770 AATGCAGATCTTCGTTAAGACGTTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTC 71829 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||| | | | |||| | || | || || | ||||| ||||| || || |||||| Sbjct 71830 CGATACTATCGACAACG-TGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACC 71888 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| ||||| | ||| ||||| || |||| |||| ||||| || ||||||| Sbjct 71889 AACAGCGCCTCATCTTCGCTGGCAAGCAATTGGAGGACGGTCGCACTCTTTCTGACTACA 71948 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | || || ||||| ||||||| ||| | || ||||| | | ||||| Sbjct 71949 ATATTCAGAAGGAGTCGACGCTCCATCTTGTCTTGCGTCTCCGCGGCGG 71997 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 ||||| ||||||||||||| ||||| | ||| || || ||||| || |||| || || Sbjct 71420 ATTCCTCCCGACCAACAGCGTCTCATCTTCGCTGGGAAGCAGCTCGAGGACGGACGTACT 71479 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || |||||||||||||| ||||| ||||||| ||| | || || ||| Sbjct 71480 CTTTCAGACTACAACATCCAGAAGGAGTCGACGCTTCATCTCGTCCTTCGT 71530 >seq19 Length=654644 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || || || ||| ||||| || |||||| | | Sbjct 380767 ATGCAGATTTTCGTCAAGACGCTGACCGGGAAGACCGTCACCCCTGAGGTCGAGTCATCG 380826 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || | || || | ||||| ||||| || || ||||||| Sbjct 380827 GATACGATCGACAACG-TGAAGGCGAAGATTCAAGACAAGGAGGGTATCCCTCCCGACCA 380885 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| || || || |||| ||||| || || ||||| Sbjct 380886 GCAGCGCCTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCTGATTACAA 380945 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || ||||| ||||||||||| | ||| ||||| || | ||||| Sbjct 380946 TATTCAGAAGGAGTCGACGCTGCATCTTGTGTTGCGTCTGCGCGGCGG 380993 >seq8 Length=1233415 Score = 96.9 bits (106), Expect = 3e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 |||||| |||| |||||||| ||||| | ||| ||||| ||||| || || | |||||| Sbjct 1004379 ATTCCCCCCGATCAACAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACC 1004438 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 | | ||||||||||||||| ||||| | || || || |||||||| ||| Sbjct 1004439 TTGAGCGACTACAACATCCAGAAGGAGTCTACCCTTCACTTGGTGCTCCGT 1004489 >seq3 Length=1836714 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/109 (78%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 ||||||| |||||||| || || || | ||| || || || || || |||| ||||| | Sbjct 1110529 TCCCGCCCGACCAACAACGTCTAATCTTCGCTGGAAAGCAACTCGAAGACGGCCGCACTC 1110470 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| ||||||||||||||| ||||| | || || |||||||| || || Sbjct 1110469 TCAGCGACTACAACATCCAGAAGGAGTCCACTCTTCATTTGGTCCTCCG 1110421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171762141440