Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq20 100 2e-16 >seq20 Length=97954 Score = 100 bits (110), Expect = 2e-16 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| ||||| | || | || ||||| ||||| ||||| || Sbjct 71734 TTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCCTCCAGTTGTTTACCGGCGAA 71675 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || || ||||| | || | ||||||||||| ||||| || || Sbjct 71674 GATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTTAC--- 71618 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | ||||||| || || ||| || |||| ||| ||||| || || ||||| |||| Sbjct 71617 -GTTATCGATGGTGTCTGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCT 71559 Query 34966 TCACAAAGATCTGCAT 34981 |||| ||||||||||| Sbjct 71558 TCACGAAGATCTGCAT 71543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632943225648