Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq10 152 6e-32 >seq10 Length=1059423 Score = 152 bits (168), Expect = 6e-32 Identities = 358/537 (67%), Gaps = 5/537 (1%) Strand=Plus/Minus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 ||||| ||||||| || | ||||| || || || | ||||| | | ||| | || Sbjct 593706 CCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCGCGCTTC 593647 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || | ||||||||| ||||| || ||||||||||||||||| || ||||| || || || Sbjct 593646 TTGAGCCAGAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAAT 593587 Query 19102 GCAACTAGTCTTTCTCCATAACTAGCATC-ATTATTATGAATCCATTTCAGTGCCCAATC 19160 ||||| || | | | | ||| | ||| || | | |||||| || ||||| || Sbjct 593586 GCAACGAGGCGTGCAGC-GAACGAAGATCGTTTGTCTTCTATCCATCGAAGAGCCCATTC 593528 Query 19161 AGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATC 19220 ||||| | || | |||||| || || || || | || ||||| | | || |||| Sbjct 593527 TGCCTTTTGCTTGATACATGGTATAGTTTCGATGGCATCGAATAGGTGCTGGCGTTCATT 593468 Query 19221 TGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTAT 19280 | ||||| | ||| | ||| || | | | || | || ||||| |||||||| || Sbjct 593467 CGGCTCTTTGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCCAT 593408 Query 19281 AGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCT 19340 || || |||||||| ||||| | ||||||| | || ||||| || | || | Sbjct 593407 CATTATTTGGAATCCGTAGAAACAGCGAGCTTCTGCGACTTGGACTTCGCTTGAGAAGCG 593348 Query 19341 TTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTT 19400 ||| || | || ||||| || || ||||| || || || || || | | | Sbjct 593347 TTCAACGAGGTTCTCATTGACGATGCCATCGGACGCCGCGAAGAAGGCGAGGATGCGGGA 593288 Query 19401 AATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCCAATCATTAATATCTTTAGATAA 19457 || || | |||||| ||||||| |||||| || | ||||||||| | Sbjct 593287 GATGAAGAATCGTTCATCGTCGGTTAATCGAAGATTCCAGTCCATCCAATCTTTAGAGAG 593228 Query 19458 ATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514 ||| | ||||| || |||||||||||||| | || | || ||||| | |||||| Sbjct 593227 ATCAATCTCTTCGACGGTCCAAAAAGAAGCTTGCGCCTGCTTGTACATCTGCCATAT 593171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107633624240