Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq10 158 2e-33 seq93 89.7 1e-12 >seq10 Length=1059423 Score = 158 bits (174), Expect = 2e-33 Identities = 380/568 (67%), Gaps = 13/568 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | ||||||||||| || | || |||||| || || ||||| || || Sbjct 591934 ATATGGCAAATGTACAAGAAAGCCGAGGCTTCCTTCTGGACTGCTGAGGAGATGGACCTT 591875 Query 25537 GCCAAGGACATGGACGGCTGG---TACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 | || || || | | |||| || || | | | ||||| || || || Sbjct 591874 TCTAAAGATATCCATGACTGGACAAACAAGCTGAACGATGGCGAGCGTCACTTCATCTCT 591815 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || || || ||||| || || ||||| || || |||| | Sbjct 591814 CACGTCCTCGCCTTCTTCGCCGCTTCGGATGGCATTGTCAACGAAAACCTCGTCGAGCGT 591755 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 ||| | | |||||||| | ||||| |||||||||||||||||||| || Sbjct 591754 TTCTCGAACGAAGTGCAAGTTGCTGAGGCTCGTTGTTTCTACGGTTTCCAGATAATGATG 591695 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACGTC 25770 || || | ||||||||| ||| | || |||| || ||||| | ||| | Sbjct 591694 GAGAACATCCACTCTGAGACCTATTC---ACTGTTGATCGACACCTACATCAAGGACTTT 591638 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 ||||| | || || |||| ||||||||| | || || | |||||| | ||||| Sbjct 591637 GCCGAACGCGACTACCTCTTTGATGCCATCGAAAATATCCCTTGTATCAAGCGCAAGGCC 591578 Query 25831 CGGTGGGCCATGAAGTGGATCAACAG-CCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 ||||||| | ||||| ||| |||| | || || | ||||| || || || Sbjct 591577 GAGTGGGCCCTTCGATGGAT-TTCAGACCAGCAATCGACATTCGCTGAGCGTCTCGTTGC 591519 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 || || ||||| ||||| ||||| ||| |||||| || || | ||||||||| | || Sbjct 591518 TTTCGCCGCTGTCGAGGGTATCTTCTTCTCCGGTTCATTCGCCTCTATCTTCTGGTTGAA 591459 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGG 26008 | || || |||||| || || |||||| ||||||||||||||||| | ||||||| Sbjct 591458 GAAGCGTGGTCTCATGCCTGGTCT-TACTTTCTCCAACGAGCTCATCAGTCGTGACGAGG 591400 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCT 26036 | | |||| || || || |||||||| Sbjct 591399 GCATGCACACCGACTTCGCTTGCCTGCT 591372 >seq93 Length=181176 Score = 89.7 bits (98), Expect = 1e-12 Identities = 201/294 (68%), Gaps = 6/294 (2%) Strand=Plus/Plus Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC 221419 ||||| || ||||||| |||||| | || | | || ||| |||| | || || Sbjct 70685 GGACTGCCTTCGTACGTCTCGTAAGCTCCTTCCTTCTCCGCCATTTCGCA-GCTAGCCTC 70743 Query 221420 -AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTT-GAGTCTCTTGGCCTCGGGAG 221477 || | || || ||||||||||||||||| || ||| | |||| |||| |||| | Sbjct 70744 GAGACCGGCATGATAGATGGTCTCAAAGATTTGCTGGTTCAACTCTC-TGGCAGCGGGCG 70802 Query 221478 AAGTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 || |||||| || | || | |||| | ||||||| || || || || ||||| ||| Sbjct 70803 AATCGAAGGGGATGCCGAGAGCCATGAACG-CGTCGGCGAGGCCTTGCACACCGATGCCG 70861 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 ||||| | ||| | | |||| || ||| || || || ||||| |||||| |||| Sbjct 70862 ATGGGACGGTGGCGCATGTTCGACTTACGCGCCTCGGGTACAGGATAGTAGTTGATGTCG 70921 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGG 221650 || | ||||||||| | | || ||| || | || ||| ||||||||| Sbjct 70922 ATAATGCGGTTGAGGTTGAACGCGACGACCTTGGCGACGTCGTGTAGCTTCTGG 70975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842872647040