Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq10 114 4e-20 seq88 86.0 2e-11 >seq10 Length=1059423 Score = 114 bits (126), Expect = 4e-20 Identities = 249/369 (67%), Gaps = 8/369 (2%) Strand=Plus/Plus Query 133292 GAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATC 133351 ||||| ||| | || ||||| || || || || | || || |||||||||||| Sbjct 593360 GAAGTCCAAGTCGCAGAAGCTCGCTGTTTCTACGGATTCCAAATAATGATGGAAAATATA 593419 Query 133352 CATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGC-A 133410 ||||| || ||||||| || |||||||| || |||||||| ||| | || | Sbjct 593420 CATTCGGAGACCTATTCTATGCTCATTGATACCTATATCAAAGAG-CCGAATGAACGCCA 593478 Query 133411 CAAACTATTCAACGCCATTAGCGAATTT---CCTTGTATTAAAAAGAAATCTGACTGGGC 133467 | |||||| | ||||| |||| | || ||||| || | || | || ||||| Sbjct 593479 GCACCTATTCGATGCCAT---CGAAACTATACCATGTATCAAGCAAAAGGCAGAATGGGC 593535 Query 133468 TATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGT 133527 | || |||||| | ||||| || | || ||| | || |||||||| || |||| Sbjct 593536 TCTTCGATGGATAGAAGACAAACGATCTTCGTTCGCTGCACGCCTCGTTGCATTCGCTGC 593595 Query 133528 AGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGG 133587 ||||||||||| || || ||| ||||| || || || ||||| || ||||| || Sbjct 593596 CGTAGAGGGCATATTCTTTTCTGGATCGTTCGCTTCAATATTCTGGCTCAAGAAGCGCGG 593655 Query 133588 TATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACAC 133647 | |||||||| || || || || || || || | || || |||| | ||||| Sbjct 593656 ATTACTACCTGGCCTTACCTTCTCCAATGAGCTCATCTGTAGAGATGAGGGCATGCACAC 593715 Query 133648 CGAATTTGC 133656 |||||| || Sbjct 593716 CGAATTCGC 593724 Score = 87.8 bits (96), Expect = 5e-12 Identities = 246/369 (67%), Gaps = 8/369 (2%) Strand=Plus/Minus Query 133292 GAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATC 133351 ||||| ||| | || || || ||| || || || | ||||| |||||| || ||| Sbjct 591745 GAAGTGCAAGTTGCTGAGGCTCGTTGTTTCTACGGTTTCCAGATAATGATGGAGAACATC 591686 Query 133352 CATTCTATCACATATTCTACTCTA-ATTGATACTTACATCAAAGATACCGTCCAGAA-GC 133409 || ||| || ||||| ||| | || || || |||||||| || | | | ||| || Sbjct 591685 CACTCTGAGACCTATTC-ACTGTTGATCGACACCTACATCAAGGA--CTTTGCCGAACGC 591629 Query 133410 -ACAAACTATTCAACGCCATTAGCGAATTTCC-TTGTATTAAAAAGAAATCTGACTGGGC 133467 || | || || | ||||| | ||| ||| |||||| || || | || ||||| Sbjct 591628 GACTACCTCTTTGATGCCATC-GAAAATATCCCTTGTATCAAGCGCAAGGCCGAGTGGGC 591570 Query 133468 TATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGT 133527 || |||||| ||| ||| ||| || ||| |||||||||||||| || | Sbjct 591569 CCTTCGATGGATTTCAGACCAGCAATCGACATTCGCTGAGCGTCTCGTTGCTTTCGCCGC 591510 Query 133528 AGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGG 133587 || ||||| || || ||| ||| | ||| |||||| || ||| | || |||||||| Sbjct 591509 TGTCGAGGGTATCTTCTTCTCCGGTTCATTCGCCTCTATCTTCTGGTTGAAGAAGCGTGG 591450 Query 133588 TATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACAC 133647 | | | ||||| || ||| || ||||| || || | ||||||| | ||||| Sbjct 591449 TCTCATGCCTGGTCTTACTTTCTCCAACGAGCTCATCAGTCGTGACGAGGGCATGCACAC 591390 Query 133648 CGAATTTGC 133656 ||| || || Sbjct 591389 CGACTTCGC 591381 >seq88 Length=206745 Score = 86.0 bits (94), Expect = 2e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 289027 TTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 || |||| |||||| ||||| || ||||| || | || |||| | | || || Sbjct 161140 TTGCCAATAGCATCGATTTCATCGATGAATATGATGCAAGGAGCGTGCTTCCTGGCCGAC 161199 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 ||||| | |||| || | ||| | || | ||||| |||| || || ||||||||| Sbjct 161200 GCAAAGAGATCTCGCACCCTGGAAGAACCGACGCCAACGAACATCTCCACGAATTCAGAA 161259 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | || || | ||| | || || |||||||| || |||| |||| || ||||| Sbjct 161260 CCAGAGACGGAGAGGAAGGGGACGTTGGCTTCGCCCGCGGTTGCCTTCGCGAGTAGTGTT 161319 Query 289207 TTACCTGTTCCAGGTGGTCC 289226 ||||| |||||||||||||| Sbjct 161320 TTACCAGTTCCAGGTGGTCC 161339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814469627942