Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq93 131 2e-24 seq10 120 4e-21 seq14 93.3 5e-13 >seq93 Length=181176 Score = 131 bits (144), Expect = 2e-24 Identities = 113/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 1627864 AACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGG 1627923 ||| ||||||||||||| ||||| |||| ||| || || |||||||||| |||||| | Sbjct 70829 AACGCGTCGGCGAGGCCTTGCACACCGATGCCGATGGGACGGTGGCGCATGTTCGACTTA 70888 Query 1627924 CGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACG 1627983 || |||||||| || || |||| |||||||||||| | ||||||||||||| | | ||| Sbjct 70889 CGCGCCTCGGGTACAGGATAGTAGTTGATGTCGATAATGCGGTTGAGGTTGAACGCGACG 70948 Query 1627984 ACCTGGACGATCTCGTGCAG 1628003 |||| | ||| ||||| || Sbjct 70949 ACCTTGGCGACGTCGTGTAG 70968 >seq10 Length=1059423 Score = 120 bits (132), Expect = 4e-21 Identities = 201/287 (70%), Gaps = 9/287 (3%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| |||||||| | |||||| || | || || |||||||| || |||||| Sbjct 591399 CCCTCGTCACGACTGATGAGCTCGTTGGAGAAAGTAAGACCAGGCATGAGACCACGCTTC 591458 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || | ||| ||||| | | ||| || ||||| ||||| |||||||| ||||| || Sbjct 591459 TTCAACCAGAAGATAGAGGCGAATGAACCGGAGAAGAAGATACCCTCGACAGCGGCGAAA 591518 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT-TGA--TCCACTTCATCGCC 869356 | | ||| ||||| || || |||||| | || || ||| |||| | ||| Sbjct 591519 GCAACGAGACGCTCAGCGAA--TGTCGAT----TGCTGGTCTGAAATCCATCGAAGGGCC 591572 Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTT 869416 || |||||||| | | | | || | | |||||||| |||||||| ||| | Sbjct 591573 CACTCGGCCTTGCGCTTGATACAAGGGATATTTTCGATGGCATCAAAGAGGTAGTCGCGT 591632 Query 869417 TCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 ||||| |||||||| ||||||||||||| || ||||||||||| Sbjct 591633 TCGGCAAAGTCCTTGATGTAGGTGTCGATCAACAGTGAATAGGTCTC 591679 Score = 114 bits (126), Expect = 2e-19 Identities = 127/167 (76%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 868718 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGC 868777 || || || |||||||| ||| | || |||| |||||| | ||| ||||||| Sbjct 594049 TCAAAGAAATTGGTCTTACCCCGCATTGATATCATCTCCATGAAGTCGAAGGGGTTGGAG 593990 Query 868778 GTCTTG-TAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGAT 868836 | |||| |||| ||||| |||||| || |||| ||||| ||||||||||| || || Sbjct 593989 G-CTTGATAGTACTTTTGATTTCCGAGAGAAACGAGTAGGCGATCGGCGACAAATTCAAT 593931 Query 868837 GTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCA 868883 |||||| |||||||||| |||||||| ||||| || || ||||||| Sbjct 593930 GTACTGACACATGAGGCTCGCGTTCATACCGATAAGGGCGACCGGCA 593884 Score = 111 bits (122), Expect = 2e-18 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 ||||| ||||| | ||| || |||||| ||||| ||||| |||||||||| || Sbjct 591025 GACGTTAGCCTTTGAGTAGTCAGAGACGCGCTTTTCGAAGAAGTTCGTCTTGCCCTGCAG 591084 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAG 868803 |||||||| ||||| | ||| ||||||| || ||||| ||| ||| || || Sbjct 591085 CGAGATCATGTCCATGAAGTCGAAGGGGTTGGTCGAATTGTACACCTTGTCGTTGCCAAG 591144 Query 868804 CGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCAT 868863 || | || || || || || || || || |||||||| |||||||| |||||||| Sbjct 591145 GGATACAAGGAGACGATCAGCCACGAATTCAATGTACTGACACATGAGCTTCGCGTTCAT 591204 Query 868864 GCCGATGAGCG 868874 ||||||||||| Sbjct 591205 GCCGATGAGCG 591215 >seq14 Length=815785 Score = 93.3 bits (102), Expect = 5e-13 Identities = 102/133 (77%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GT 19110 ||||||||| ||||| || ||||| |||||||| || ||||||| || || || || Sbjct 325465 CATCGGCGGAACGGTAACCTGCGTCATACGCAACGTCCCTTCAGGCCTTGGTGAACCCGT 325406 Query 19111 GCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGG 19170 | || || || |||| ||||||||||| || |||||||| || ||||| || ||||| Sbjct 325405 G-TTCGATAAATTCGAAGCCGCGCTCGCGCATGCCATGCTCTCTATCCCTGCAACCAAAT 325347 Query 19171 GATTCGAGATTGG 19183 ||||| ||||| Sbjct 325346 CGTTCGAAATTGG 325334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107125577262622