Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq84 89.7 4e-12 >seq84 Length=229744 Score = 89.7 bits (98), Expect = 4e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 282722 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGA 282781 |||| ||||| ||||| ||||||||| |||| || || | || || |||||||| || Sbjct 73290 TGATTCTTGGCGGCATCACCAATCAGACGTTCGGTGTCCGAGAACGAGACATATGAGGGT 73231 Query 282782 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCT 282841 || || | ||||||||||| || || || || || ||| | |||||||| ||||| Sbjct 73230 GTCGTTCTGTTACCTTGATCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCG 73171 Query 282842 ACACAACTA 282850 || |||||| Sbjct 73170 ACGCAACTA 73162 Score = 89.7 bits (98), Expect = 4e-12 Identities = 522/824 (63%), Gaps = 15/824 (2%) Strand=Plus/Minus Query 281662 GGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 281721 |||||||| ||| || || || || | ||| | || ||||| | |||||| | |||| Sbjct 74462 GGTCATAACACCTCCGGCGGTCTCGATACCTAATGACAGAGGGGCGACATCGAGGAGGAG 74403 Query 281722 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 281781 || || || || || || | || ||| || || || || | || ||||| Sbjct 74402 AAGATCCTGGGTCTTCTCCGAGGTGTCTCCGGAAAGGATGGCGGCCTGGACGGCGGCACC 74343 Query 281782 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT 281841 || ||||| || ||||| || || | | | || | | || || |||||||| | Sbjct 74342 GTAGGCAACGGCCTCATCGGGGTTGATGCTCTTGTTGGGCTCCTTGCCGTTGAAAAAGTC 74283 Query 281842 TGAAAGAAG-TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 281900 || | || ||| | | ||| |||| | || || || || | || ||||| | Sbjct 74282 AGACACGAGCTTGACGATGCGGGGGA-TACGGGTGGAGCCACCGACGAGGACGATTTCGT 74224 Query 281901 GCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAG 281960 | || | | || || | || ||||| | ||| || || ||||| || ||| || Sbjct 74223 GGACGTTGGCCTTGTCGATCTTGGAATCACGCAGAACCTTCTCCACGGGCTCGAGAGTAG 74164 Query 281961 CTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA 282019 | || | || ||||||||| ||||| ||| | || ||| || | || || Sbjct 74163 AGCGGAAGAGATCCTGACAAAGTTCCTCGAAACGAGCACGGGT--GAGGGAGGTGTAGAA 74106 Query 282020 -TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 282078 || || || ||||| | ||| |||| ||| || | ||||| || | || || || | Sbjct 74105 GTCGATACCCTCGAAGAGAGAGTCAATTTCGATGGAGGTTTGGGTGGCGGAGGAGAGGGT 74046 Query 282079 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA 282138 ||| || |||||||| || || || | || | || | || | | | || | Sbjct 74045 ACGCTTGGCACGTTCGCAAGCGGTACGGAGACGACGGAGAGCACGGGG-GTTGGAGGAGA 73987 Query 282139 -ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 282197 ||| | || | || | |||||| || | || | | || ||||| || || | Sbjct 73986 GATCCTTCTTGTGCTTGCGCTTGAACTCCTGGACGAAGTGGTTGACGAGACGGTTGTCGA 73927 Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 282257 |||||||||| || | | || | || | ||| ||| | |||| ||| | || |||| Sbjct 73926 AATCTTCACCGCCAAGATGTGTGTCACCGGCCGTGGCTTTGACTTCGAAGATACCCTCTT 73867 Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT-C 282316 | | | || || | ||||| ||||| ||||| | ||| || || | || || | Sbjct 73866 CGATGGTCAGGAGGGAGACATCGAAAGTTCCTCCACCGAGATCGAAGATCAAGACGTTGC 73807 Query 282317 ATT--TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 282374 || | || | || || |||||||| || || | || || || || || || | Sbjct 73806 GTTCGCCAATGAC---CTTCTTGTCAAGACCGTAGGCGATGGCCGCGGCGGTAGGCTCGT 73750 Query 282375 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 282434 | || || | | || || ||||||| || | || || ||||| ||||| |||| | Sbjct 73749 TGATGATACGGAGGACGTTGAGACCAGAGATGGTACCAGCGTCTTTGGTGGCCTGTCGCT 73690 Query 282435 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478 | |||||||| || || ||||| ||||| | |||||||| |||| Sbjct 73689 GAGAATCGTTGAAGTAGGCAGGGACAGTGACAACGGCAT-TGTT 73647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740622250101516