Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq10 154 2e-32 >seq10 Length=1059423 Score = 154 bits (170), Expect = 2e-32 Identities = 377/569 (66%), Gaps = 8/569 (1%) Strand=Plus/Minus Query 39606 TAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAG 39665 |||||| | ||| ||||| || || | |||||||||||||| || | || || | Sbjct 593738 TAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGG 593679 Query 39666 AAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATC 39725 | || || || ||||| | || || ||||| |||||||| ||||| | ||| || |||| Sbjct 593678 AGAAGGTAAGGCCAGGTAGTAATCCGCGCTTCTTGAGCCAGAATATTGAAGCGAACGATC 593619 Query 39726 CAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTAT 39785 |||||||||| ||||| ||||| || || |||||||| || | | || ||| || Sbjct 593618 CAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTGCAGCG-AACGAAGAT 593560 Query 39786 CATT----ATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTT 39841 | || | |||||| | ||||| || || || | ||| | ||| || || ||| Sbjct 593559 CGTTTGTCTTCTATCCATCGAAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATAGTT 593500 Query 39842 TCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAAC 39901 || || |||| || || | || ||||| ||||| | ||| ||||| || | | Sbjct 593499 TCGATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGC 593440 Query 39902 AGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTT 39961 | | ||| | || ||||| || ||||| ||| || || |||||||| ||||| | Sbjct 593439 ATAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGA 593380 Query 39962 GCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCA 40021 ||||| | | ||| || || | || | ||| | | || ||||| || || ||| Sbjct 593379 GCTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACGAGGTTCTCATTGACGATGCCA 593320 Query 40022 TCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT 40081 || || || || || || | | | || || || ||||||| || ||| Sbjct 593319 TCGGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAAT 593260 Query 40082 ---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGAC 40138 ||||||||| | |||||| || | ||| | ||||| | |||||||| || Sbjct 593259 CGAAGATTCCAGTCCATCCAATCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAGAA 593200 Query 40139 GCCTCTGCCTTTTTGTACATGTTCCATAT 40167 || | |||| |||||||| | |||||| Sbjct 593199 GCTTGCGCCTGCTTGTACATCTGCCATAT 593171 Score = 140 bits (154), Expect = 4e-28 Identities = 370/561 (66%), Gaps = 12/561 (2%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| |||||||| || | |||||| || | ||| || | ||||| || || || || Sbjct 591377 GCAAGCGAAGTCGGTGTGCATGCCCTCGTCACGACTGATGAGCTCGTTGGAGAAAGTAAG 591436 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 |||||||| ||||||||||| || | ||| || || | || || || || || ||||| Sbjct 591437 ACCAGGCATGAGACCACGCTTCTTCAACCAGAAGATAGAGGCGAATGAACCGGAGAAGAA 591496 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCAT--TATG- 39792 ||| || || || || || || ||||| || | ||| || | | | | | | || Sbjct 591497 GATACCCTCGACAGCGGCGAAAGCAACGAGACGCTCAGCGAATGTCGATTGCTGGTCTGA 591556 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 ||||| | ||||| || || || ||| | |||||| || |||| || |||| Sbjct 591557 AATCCATCGAAGGGCCCACTCGGCCTTGCGCTTGATACAAGGGATATTTTCGATGGCATC 591616 Query 39853 AAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACAT 39912 |||||| || | ||| || || || | || || || || ||||| ||| | Sbjct 591617 AAAGAGGTAGTCGCGTTCGGCAAAGTCCTTGATGTAGGTGTCGATCAACAGTGAATAGGT 591676 Query 39913 TTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 39972 || || |||||||| || ||| ||||| || ||||| ||||| | || |||| || Sbjct 591677 CTCAGAGTGGATGTTCTCCATCATTATCTGGAAACCGTAGAAACAACGAGCCTCAGCAAC 591736 Query 39973 TTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGC 40032 ||| || || | || | || | | ||||| || || || ||||| |||||| Sbjct 591737 TTGCACTTCGTTCGAGAAACGCTCGACGAGGTTTTCGTTGACAATGCCATCCGAAGCGGC 591796 Query 40033 AAAAAATGCCAATACATGTTTAATAAA---ATATTTTTCATCGGGTGTCAATTTAT---T 40086 || || || | || || || || | | ||||| ||| || | | Sbjct 591797 GAAGAAGGCGAGGACGTGAGAGATGAAGTGACGCTCGCCATCG---TTCAGCTTGTTTGT 591853 Query 40087 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGC 40146 |||||||| ||||||||| || | || | || ||||| ||||| || || ||||| || Sbjct 591854 CCAGTCATGGATATCTTTAGAAAGGTCCATCTCCTCAGCAGTCCAGAAGGAAGCCTCGGC 591913 Query 40147 CTTTTTGTACATGTTCCATAT 40167 || |||||||| | |||||| Sbjct 591914 TTTCTTGTACATTTGCCATAT 591934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907374664240