Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq10 100 4e-16 seq88 91.5 2e-13 seq14 91.5 2e-13 >seq10 Length=1059423 Score = 100 bits (110), Expect = 4e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 122692 ATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATA 122751 || || || || ||||| ||||| ||||||||||| |||||||||||||| | ||| Sbjct 591414 ATGAGCTCGTTGGAGAAAGTAAGACCAGGCATGAGACCACGCTTCTTCAACCAGAAGATA 591473 Query 122752 GCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACGCAAAAAGGCGTTCG 122811 | | |||||| |||||||||||||||||||| ||| || || |||| || || || Sbjct 591474 GAGGCGAATGAACCGGAGAAGAAGATACCCTCGACAGCGGCGAAAGCAACGAGACGCTCA 591533 Query 122812 GCGAAGGAGCGAGACTTTGCATCAAA-CCATTTCATTGCCCATTTCGCCTTCTTCTCAAT 122870 ||||| | ||| | | | ||| |||| | ||||| | ||||| || || Sbjct 591534 GCGAATG-TCGATTGCTGGTCTGAAATCCATCGAAGGGCCCACTCGGCCTTGCGCTTGAT 591592 Query 122871 ACATGGTACAGTTTGGATGGCTTCAAA 122897 ||| || | | ||| |||||| ||||| Sbjct 591593 ACAAGGGATATTTTCGATGGCATCAAA 591619 >seq88 Length=206745 Score = 91.5 bits (100), Expect = 2e-13 Identities = 231/345 (67%), Gaps = 5/345 (1%) Strand=Plus/Plus Query 11620 CTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATT-TTCGCGGGCGA 11678 |||||| | ||||| || ||||| ||||| | || || || | ||| || ||| Sbjct 161139 CTTGCCAATAGCATCGATTTCATCGATGAATATGATGCAAGGAGCGTGCTTCCTGGCCGA 161198 Query 11679 TTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG 11738 |||||||||| || ||||| | ||| || ||||| ||||||||||| || | | Sbjct 161199 CG-CAAAGAGATCTCGCACCCTGGAAGAACCGACGCCAACGAACATCTCCACGAATTCAG 161257 Query 11739 CGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGG 11797 ||||| || | || ||| ||||| || | ||| |||||| | || ||||| || Sbjct 161258 AACCAGAG-ACGGAGAGGAAGGGGACGTTGGCTTCGCCCGCGGTTGCCTTCGCGAGTAGT 161316 Query 11798 GTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTT 11857 || || || || || || || | ||||| ||| ||||| |||||||| |||||| | Sbjct 161317 GTTTTACCAGTTCCAGGTGGTCCAGAGAGAATGGCCCCTCGCGGGATCTTCGCACCAAGT 161376 Query 11858 CCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCC 11917 || || |||| | ||| || || | || | ||| | || || || ||| Sbjct 161377 TTCTCGTACTTCGCGGGATCCTTCAGGAACTGAACGAACTCCATGACCTCTTCCTTTGCC 161436 Query 11918 GCGTCAATCCCCTCAACATCACTGAAGCGGGTTTTAATCTCCTGT 11962 | || || || | ||||| ||||| ||| |||| | || |||| Sbjct 161437 TCATCCATGCCAGCGACATCCCTGAACCGGATTTTGA-CTTCTGT 161480 >seq14 Length=815785 Score = 91.5 bits (100), Expect = 2e-13 Identities = 163/234 (70%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 182610 TGTTGAAGACCAAGGATCTTCTTGAGATCATTGAACTCCTGGTT-----TGATGTAAGCT 182664 ||||| ||||| | ||||||||||| | | | ||||| ||| |||| | | | Sbjct 309979 TGTTGTAGACCCATGATCTTCTTGATGTTTTGTATCTCCTCGTTCTTCATGATCTGATCA 309920 Query 182665 GTGCCACCGAAGCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAACACACCGTAGT 182724 |||| | || || || ||||| ||||||| ||||| ||||| || || ||| Sbjct 309919 -TGCCTC----GCCTCTCGTACATTGAGTAATTTACCTCGAAGAGGGAAGACGCCAAAGT 309865 Query 182725 GATCACGACCAACGACAGAGAGACCCGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCG 182784 |||||||||||||| | | ||| || || || |||| ||| || || ||||| || | Sbjct 309864 TGTCACGACCAACGACGGCCAAACCAGCGACTGCCAGGGATTTGGCGGAGTCACCTTCGG 309805 Query 182785 TGACAATGAGAGTACACTTTCCAG-ATTGTGCCGTACCCGCCTTGTTCGCGTCA 182837 | | ||||||||| || || || | ||| | || || || ||||| |||||| Sbjct 309804 TAAGAATGAGAGTGCATTTCCCTGCATTCT-TGGTGCCGGCGTTGTTGGCGTCA 309752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030696833600