Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq10 123 3e-23 seq14 93.3 5e-14 seq88 87.8 2e-12 >seq10 Length=1059423 Score = 123 bits (136), Expect = 3e-23 Identities = 164/225 (73%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 ||||||||||| |||||| || || ||||| ||||| ||||||||||| |||||| Sbjct 591399 CCCTCGTCACGACTGATGAGCTCGTTGGAGAAAGTAAGACCAGGCATGAGACCACGCTTC 591458 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 ||||||||||| || | ||||| || ||||||||||| ||||| ||| ||||| Sbjct 591459 TTCAACCAGAAGATAGAGGCGAATGAACCGGAGAAGAAGATACCCTCGACAGCGGCGAAA 591518 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA-CCACTTCATCGCCCACTG 130212 |||| |||||||||||| || | || | || | ||| ||| | ||||||| Sbjct 591519 GCAACGAGACGCTCAGCGAATG-TCGATTGCTGGTCTGAAATCCATCGAAGGGCCCACTC 591577 Query 130213 CGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 ||||| || |||||| |||| | | ||| || |||||||| Sbjct 591578 GGCCTTGCGCTTGATACAAGGGATATTTTCGATGGCATCAAAGAG 591622 >seq14 Length=815785 Score = 93.3 bits (102), Expect = 5e-14 Identities = 212/315 (67%), Gaps = 12/315 (4%) Strand=Plus/Minus Query 179808 ATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACC 179867 ||||||||| ||||| | ||||| || | || ||| || | ||| ||||| Sbjct 310040 ATCCGTCATGATCATCAATCGACCGTATCTCAGGCTGGAGACGTTGGTATACTCCTTGTT 309981 Query 179868 TTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTT-----TGATGTGAGT 179922 ||||| ||||||| ||||||||||| | | | ||| | ||| |||| ||| | Sbjct 309980 GTGTTGTAGACCCATGATCTTCTTGATGTTTTGTATCTCCTCGTTCTTCATGATCTGA-T 309922 Query 179923 TGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAG 179982 ||| | || ||||| ||||| | || || || |||||||| || || || Sbjct 309921 CATGCCTC----GCCTCTCGTACATTGAGTAATTTACCTCGAAGAGGGAAGACGCCAAAG 309866 Query 179983 TGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCC 180042 | ||||||||||| || | | |||||| ||||| |||| || ||||| ||||| || Sbjct 309865 TTGTCACGACCAACGACGGCCAAACCAGCGACTGCCAGGGATTTGGCGGAGTCACCTTCG 309806 Query 180043 GTCACGATGAGCGTACACTTTCCAG-ATTGTGCCGTCCCTGCCTTGTTCGCGTCGTCCAA 180101 || | ||||| || || || || | ||| | || || || ||||| ||||| | Sbjct 309805 GTAAGAATGAGAGTGCATTTCCCTGCATTCT-TGGTGCCGGCGTTGTTGGCGTCAGAGAG 309747 Query 180102 CTTGGGAATACCAGT 180116 ||||| || ||||| Sbjct 309746 CTTGGCCATGCCAGT 309732 >seq88 Length=206745 Score = 87.8 bits (96), Expect = 2e-12 Identities = 234/351 (67%), Gaps = 9/351 (3%) Strand=Plus/Plus Query 14123 GCGATGACAACGATGCCCGTCTCGT-TATCAAAGCCATCCATCTCAGTCAAGAGTTGATT 14181 |||| |||||| ||| | ||| || | ||||||| |||||||| ||| || || || Sbjct 161026 GCGAGGACAACAATGTGC-TCTTGTGTGCCAAAGCCGTCCATCTCCACCAACAGCTGGTT 161084 Query 14182 GATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCACCCGCACTGCGTTG----CTTAC 14237 | ||| || | ||| ||||| || | | || || || || | ||| | Sbjct 161085 AAGAGTTGACTCTCTTTCGTCATTGCCACCGAAATTGCC-GCCCTTCGCTCTCGACTTGC 161143 Query 14238 CGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATT-TTCACGGGCAACTTCA 14296 | | || || |||||||||||||| | ||| || || | ||| || | || || Sbjct 161144 CAATAGCATCGATTTCATCGATGAATATGATGCAAGGAGCGTGCTTCCTGGCCGACG-CA 161202 Query 14297 AAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCG 14356 |||| ||||||||| || | |||||| || || ||||||||||| || | | | Sbjct 161203 AAGAGATCTCGCACCCTGGAAGAACCGACGCCAACGAACATCTCCACGAATTCAGAACCA 161262 Query 14357 GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTC 14416 || || |||||||||||| | ||| |||||| | || ||||| || || || Sbjct 161263 GAGACGGAGAGGAAGGGGACGTTGGCTTCGCCCGCGGTTGCCTTCGCGAGTAGTGTTTTA 161322 Query 14417 CCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 14467 || || || ||| || | ||||| ||| || || |||||| | |||||| Sbjct 161323 CCAGTTCCAGGTGGTCCAGAGAGAATGGCCCCTCGCGGGATCTTCGCACCA 161373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433916746960