Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq93 134 2e-26 seq10 118 1e-21 >seq93 Length=181176 Score = 134 bits (148), Expect = 2e-26 Identities = 289/429 (67%), Gaps = 10/429 (2%) Strand=Plus/Minus Query 19844 AAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATG 19903 || || || || ||||| ||||| | |||||||| ||||| || || || || ||||| Sbjct 71121 AAATCTAACCAAAAGAATCTCGGCACCATCAAGTCCTCCAATCTTTGCACGGAGATCATC 71062 Query 19904 GAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGCCTGCCGACT 19963 ||| ||| |||||||||||||||||| || || || |||||||| || || || Sbjct 71061 GAGTACTCCTCGCCGGACGAGACTGCCGTTTGCAACCTAGCGTCCCTCGCGCTCCCATCT 71002 Query 19964 TTCGTC---AAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTC 20020 ||| || |||| | | | |||| || | |||| || || ||||||| Sbjct 71001 TTCATCTCCAAGGGTACATACA---ACTTCCAGAAGCTACACGACGTCGCCAAGGTCGTC 70945 Query 20021 ACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCG--ACCGAGGCGGCGCGCA 20078 || || || || ||| | ||||| |||| || || ||| | |||||| | Sbjct 70944 GCGTTCAACCTCAACCGCATTATCGACATCAACTACTATCCTGTACCC--GAGGCGCGTA 70887 Query 20079 AGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCA 20138 ||||||| ||||||||||| || |||| ||||| || || ||||| ||||||| |||| Sbjct 70886 AGTCGAACATGCGCCACCGTCCCATCGGCATCGGTGTGCAAGGCCTCGCCGACGCGTTCA 70827 Query 20139 TGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCG 20198 || |||||| || | ||||| ||| || | ||| | ||| || ||||| | Sbjct 70826 TGGCTCTCGGCATCCCCTTCGATTCGCCCGCTGCCAGAGAGTTGAACCAGCAAATCTTTG 70767 Query 20199 AGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGT 20258 || || | || || || | ||| || |||||| | || | |||| || | | Sbjct 70766 AGACCATCTATCATGCCGGTCTCGAGGCTAGCTGCGAAATGGCGGAGAAGGAAGGAGCTT 70707 Query 20259 ACGAGACGT 20267 ||||||||| Sbjct 70706 ACGAGACGT 70698 Score = 134 bits (148), Expect = 2e-26 Identities = 289/426 (68%), Gaps = 16/426 (4%) Strand=Plus/Plus Query 78737 ACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCAT---GACTCGAGCAGGGCCGCGT 78793 |||||||||||| ||| |||| || || | |||||| | |||||| ||| | Sbjct 70698 ACGTCTCGTAAGCTCCTTCCTTCTCCGCCATTTCGCAGCTAGCCTCGAGACCGGCA---T 70754 Query 78794 GGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAA 78853 | || | | ||| ||||| || ||| | ||| | || || | ||||| | | Sbjct 70755 GATAGATGGTCTCAAAGATTTGCTGGTTCAACTCTCTGGCAGCGGGCGAATCGAAGGGGA 70814 Query 78854 GGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGC 78913 |||||| |||||| | ||||| ||||| || || ||||| |||| || ||||||| Sbjct 70815 TGCCGAGAGCCATGAACGCGTCGGCGAGGCCTTGCACACCGATGCCGATGGGACGGTGGC 70874 Query 78914 GCATGTTGCTCTTTCGGGCCGCCTCGGTC---GGGTAAAAGTTCCGATCGATGACGCGGT 78970 ||||||| ||| || |||||||| || || |||| ||||| | ||||| Sbjct 70875 GCATGTTCGACTTACG---CGCCTCGGGTACAGGATAGTAGTTGATGTCGATAATGCGGT 70931 Query 78971 TCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTC 79030 | ||||| || ||||||| | || |||| | || ||| | | || | | Sbjct 70932 TGAGGTTGAACGCGACGACCTTGGCGACGTCGTGTAGCTTCTGGAAGTTGTA-TG-TACC 70989 Query 79031 CTTTGA--TGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGG 79088 ||| || |||||| || || || || || |||||||| ||||| ||||||||||| Sbjct 70990 CTTGGAGATGAAAGATGGGAGCGCGAGGGACGCTAGGTTGCAAACGGCAGTCTCGTCCGG 71049 Query 79089 GCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTT 79148 || ||||||||| || ||||| | ||| || |||||||||||||||| ||||| Sbjct 71050 CGAGGAGTACTCGATGATCTCCGTGCAAAGATTGGAGGACTTGATGGTGCCGAGATTCTT 71109 Query 79149 CTGGTT 79154 ||||| Sbjct 71110 TTGGTT 71115 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Plus Query 79699 GTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCA-GCTCGACAT 79757 || |||||||| ||||| || |||||||||||||| ||||| |||||| | | | | Sbjct 71811 GTGTCGTAGATTCCCTCTATGGAGTCGTCCTTCATGCAGACCAAGAAGCACGAGCTA-AG 71869 Query 79758 CTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTG 79817 |||||||| | ||||| || ||||| || || || | |||||||||||| | | Sbjct 71870 CTGTGGGTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCGTGCGTGAAG----TATC 71925 Query 79818 GCT----CATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGA 79873 ||| ||| || | ||| ||||| ||||||| || || | || || ||||||| Sbjct 71926 GCTCCGACATGAGGTTGTATGTCTCGATGACGCGGTCGATATCAGCTCCATGTATGCCGA 71985 Query 79874 CCGCGACGCGCATGA 79888 | || || ||||||| Sbjct 71986 CAGCAACACGCATGA 72000 Score = 86.0 bits (94), Expect = 7e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 79387 AAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCC 79446 || ||||| |||||||||| || ||| || || || ||| || || | || Sbjct 71446 AAAAGGTCAGGGATCCACAATGCGTAGAACAGATCACGAGCACGAGATTCTTCCTTCCCG 71505 Query 79447 TGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATG 79506 |||||| | || ||||| ||||| | || ||||||||||| ||||| |||||||| Sbjct 71506 TGGTTCTTCCTCAAGTCGAGGAAGTCGAAGACATCGGCGTGCCATGGCTCGAGATAGATA 71565 Query 79507 GCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAA 79566 ||||| | ||| ||||||| || || |||| || || || || ||| | | Sbjct 71566 GCGAATGCACCAGGGCGCTTGTTACCTCCTTGGTCAACATATCGAGCTGTGGCATCATAC 71625 Query 79567 ACTCGGAGCATGGGCACGATGCCGT 79591 |||| ||||| ||||| ||||||| Sbjct 71626 GCTCGAAGCATTGGCACAATGCCGT 71650 >seq10 Length=1059423 Score = 118 bits (130), Expect = 1e-21 Identities = 349/532 (66%), Gaps = 16/532 (3%) Strand=Plus/Minus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| |||||||| | ||| |||||| | | |||||||| ||||| | ||| Sbjct 591924 TGTACAAGAAAGCCGAGGCTTCCTTCTGGACTGCTGAGGAGATGGACCTTTCTAAAGATA 591865 Query 59653 TGAAGGATTGGG---ACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGG 59709 | | || ||| ||||||| || | | ||||| || |||||| ||||| | Sbjct 591864 TCCATGACTGGACAAACAAGCTGAACGATGGCGAGCGTCACTTCATCTCTCACGTCCTCG 591805 Query 59710 CCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGG 59769 |||||||||| || ||||| ||||| | ||||| | | | | || || || | Sbjct 591804 CCTTCTTCGCCGCTTCGGATGGCATTGTCAACGAAAACCTCGTCGAGCGTTTCTCGAACG 591745 Query 59770 ATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCC 59829 | || || |||| ||||| || | ||||||| | ||| | | ||| |||| Sbjct 591744 AAGTGCAAGTTGCTGAGGCTCGTTGTTTCTACGGTTTCCAGATAATGATGGAGAACATCC 591685 Query 59830 ACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGAT----CCGGAAGAGAAG 59885 |||| ||||| || || || ||||||| | | ||||||| ||| | | || Sbjct 591684 ACTCTGAGACCTATTCACTGTTGATCGACACCTACATCAAGGACTTTGCCGAACGCGACT 591625 Query 59886 GCTGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGC 59944 | || || |||||| || | |||| | | | || | || || || ||||| Sbjct 591624 AC----CTCTTTGATGCCATCGAAAATATCCCTTGTA-TCAAGCGCAAGGCCGAGTGGGC 591570 Query 59945 CATGCAGTGGATG--AGTCCTGGAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATG 60001 | | | ||||| || || | | | |||| || | |||||| | ||||| || Sbjct 591569 CCTTCGATGGATTTCAGACCAGCAATCGACATTCGCTGAGCGTCTCGTTGCTTTCGCCGC 591510 Query 60002 CGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGG 60061 || || || ||||||||||| || || ||| |||| |||||| | || |||||||| Sbjct 591509 TGTCGAGGGTATCTTCTTCTCCGGTTCATTCGCCTCTATCTTCTGGTTGAAGAAGCGTGG 591450 Query 60062 CCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 |||||||| || || | ||||||||||||||| || || ||||||||| Sbjct 591449 TCTCATGCCTGGTCTTACTTTCTCCAACGAGCTCATCAGTCGTGACGAGGGC 591398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523661811040