Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq20 181 1e-40 seq19 167 3e-36 seq3 89.7 6e-13 seq26 86.0 7e-12 >seq20 Length=97954 Score = 181 bits (200), Expect = 1e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || |||||| | ||||||||||| || ||||| ||||| ||||| Sbjct 71770 AATGCAGATCTTCGTTAAGACGTTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTC 71829 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| || | || ||||||| || ||||||||||||||||| || ||||| ||||| Sbjct 71830 CGATACTATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCA 71889 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||| || || || ||||| |||||| | ||||| | ||| || || | ||||| || Sbjct 71890 ACAGCGCCTCATCTTCGCTGGCAAGCAATTGGAGGACGGTCGCACTCTTTCTGACTACAA 71949 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || ||||| || || || ||||| ||||||||||| ||||| || Sbjct 71950 TATTCAGAAGGAGTCGACGCTCCATCTTGTCTTGCGTCTCCGCGGCGG 71997 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||||||||| || || || ||||| ||||| Sbjct 71543 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCA 71602 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || ||||||||||| || ||||| ||||| Sbjct 71603 GACACCATCGATAACGTAAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCAA 71662 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || ||||| ||||| ||||| | || || || | ||||| || Sbjct 71663 CAGCGTCTCATCTTCGCCGGTAAACAACTGGAGGACGGCCGCACTCTTTCTGACTACAAC 71722 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||||||||| || ||||| || | ||||| ||||||||| Sbjct 71723 ATCCAGAAGGAATCCACCCTCCATCTCGTTCTCCGTCTCCGCGGTGGA 71770 Score = 116 bits (128), Expect = 4e-21 Identities = 99/122 (81%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 |||||||| ||||| |||||||| || || ||||| ||||| |||||||| | ||||| Sbjct 71420 ATTCCTCCCGACCAACAGCGTCTCATCTTCGCTGGGAAGCAGCTCGAGGACGGACGTACT 71479 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || ||||||| || |||| ||||| || || |||||||| ||| | |||||||||||| Sbjct 71480 CTTTCAGACTACAACATCCAGAAGGAGTCGACGCTTCATCTCGTCCTTCGTCTTCGCGGT 71539 Query 27631 GG 27632 || Sbjct 71540 GG 71541 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || || |||||||| || || ||||| ||||| Sbjct 71252 ATGCAAATCTTCGTCAAGACCCTCACTGGAAAGACTATCACCCTCGAGGTGGAGTCGTCC 71311 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 |||| ||| | || | ||||| || || |||||||||||||| Sbjct 71312 GATACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGG 71355 >seq19 Length=654644 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||||||||| ||||| ||||| | || | |||||| |||||| Sbjct 380767 ATGCAGATTTTCGTCAAGACGCTGACCGGGAAGACCGTCACCCCTGAGGTCGAGTCATCG 380826 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | || ||||||| || ||||| ||||||||||| || ||||| |||||| Sbjct 380827 GATACGATCGACAACGTGAAGGCGAAGATTCAAGACAAGGAGGGTATCCCTCCCGACCAG 380886 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || |||||||||||||| | || || || | || || ||| Sbjct 380887 CAGCGCCTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCTGATTACAAT 380946 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || ||||| || |||||||| ||||| || Sbjct 380947 ATTCAGAAGGAGTCGACGCTGCATCTTGTGTTGCGTCTGCGCGGCGG 380993 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || || |||||||| ||||| ||||| ||||| Sbjct 380481 ATGCAGATCTTTGTCAAGACACTCACTGGAAAGACTATCACTCTCGAGGTGGAGTCGTCC 380540 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | || | || | |||||||| || |||||||||||||| Sbjct 380541 GACACGATCGACAACGTAAAGGCTAAGATCCAGGACAAGGAGGG 380584 >seq3 Length=1836714 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || || |||||||| || |||||||| ||||| Sbjct 1110738 ATGCAAATCTTCGTCAAGACCCTAACGGGGAAGACTATCACCCTTGAGGTGGAGTCCTCC 1110679 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | ||| | ||||| |||||||||||||| || || Sbjct 1110678 GACACCATCGACAATGTCAAGGCCAAAATTCAGGACAAAGAAGG 1110635 >seq26 Length=527276 Score = 86.0 bits (94), Expect = 7e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24744 GAGATGTTTGGCAAGGTGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGA 24803 ||| ||| |||||||| ||||||||| || ||||| || || || ||||| || Sbjct 179728 GAGCTGTACGGCAAGGTAGTGGAGACGCCGCAAAGCGAGACGACGCCCTTCTATCCTCGT 179669 Query 24804 AGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCC 24863 || || |||||| | | ||| ||| ||| || |||||| || || || ||||| Sbjct 179668 AGTCCCTATGGGTGCGCCAAGTTGTACGCATATTGGATAGTGGTCAATTATCGGGAGGCG 179609 Query 24864 CATGGGATATATGCATGCAACGGAATTCTGTTCAACCATGAGTCGGAGCGTCGGGGACCT 24923 | ||||| | |||||||| || || ||||||||||| ||| | | || || | Sbjct 179608 TACGGGATGTTCGCATGCAATGGGATACTGTTCAACCACGAGAGCCCGAGACGAGG-GCG 179550 Query 24924 GAATTT-GTTACACGAAAGATTAC 24946 || ||| || ||||| |||||||| Sbjct 179549 GACTTTCGTCACACGGAAGATTAC 179526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309216605920