Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq20 122 5e-23 seq19 96.9 2e-15 >seq20 Length=97954 Score = 122 bits (134), Expect = 5e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | || | |||||| ||| ||||| || ||||| || || ||||| || || Sbjct 71760 AGACGGAGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGG 71701 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || |||||||||||||| || || | |||||||||||| || || | |||||| Sbjct 71700 CCGTCCTCCAGTTGTTTACCGGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCC 71641 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | || ||| || || |||||| | ||| || || | ||| Sbjct 71640 TTGTCTTGGATC-TTGGCCTTTACGTTATCGATGGTGTCTGAGGACTCGACCTCGAGGGT 71582 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | || ||||| || |||||||| Sbjct 71581 GATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 71543 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | |||||||| || | |||||| || |||||| ||||| || || || ||| Sbjct 71997 CCGCCGCGGAGACGCAAGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAA 71938 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || | ||| || || || || || | ||||||||||| || || Sbjct 71937 AGAGTGCGACCGTCCTCCAATTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAGGG 71878 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||| || | || ||| | || || || | ||| || Sbjct 71877 ATACCCTCCTTGTC-CTGAATCTTCGCCTTCACGTTGTCGATAGTATCGGAGGACTCGAC 71819 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || || ||||| ||||| || || || |||||||| Sbjct 71818 CTCGAGAGTGATGGTCTTGCCGGTCAACGTCTTAACGAAGATCTGCAT 71771 >seq19 Length=654644 Score = 96.9 bits (106), Expect = 2e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||||||||| | ||| || || |||||| ||||| || ||||| ||| Sbjct 380993 CCGCCGCGCAGACGCAACACAAGATGCAGCGTCGACTCCTTCTGAATATTGTAATCAGAA 380934 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || ||||| || ||||| || || | ||||| ||||| || || Sbjct 380933 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGG 380874 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | |||||||||||| ||||| Sbjct 380873 ATACCCTCCTTGTCTTGAATCTT 380851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728963262678