Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq20 109 4e-19 >seq20 Length=97954 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||| ||||| || || ||| | Sbjct 71543 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCA 71602 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | |||| || || ||||| || || | || || || ||| Sbjct 71603 GACACCATCGATAACGTAAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCAA 71662 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || ||||| ||||||||||| |||| |||||| | || |||||| Sbjct 71663 CAGCGTCTCATCTTCGCCGGTAAACAACTGGAGGACGGCCGCACTCTTTCTGACTACAAC 71722 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || || ||||| | ||| | ||| Sbjct 71723 ATCCAGAAGGAATCCACCCTCCATCTCGTT 71752 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| |||||||| || | || || || || ||||||||||| || || ||| | Sbjct 71770 AATGCAGATCTTCGTTAAGACGTTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTC 71829 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | || | | || || ||| ||||| || ||| | || || || || Sbjct 71830 CGATACTATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCA 71889 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || ||||| ||| |||| |||| |||||| | || ||||| Sbjct 71890 ACAGCGCCTCATCTTCGCTGGCAAGCAATTGGAGGACGGTCGCACTCTTTCTGACTACAA 71949 Query 23790 CATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 71950 TATTCAGAAGGAGTCGAC 71967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008916164328