Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq20 131 4e-25 seq19 107 5e-18 seq3 89.7 1e-12 >seq20 Length=97954 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || ||||| |||||||| || |||| ||||| || | | ||| | || || Sbjct 71754 AGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCC 71695 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || || |||||||| || || ||||||||||| || || || ||||||||| Sbjct 71694 TCCAGTTGTTTACCGGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCT 71635 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || |||||||||||||||| || || || | ||||| ||| Sbjct 71634 TGGATCTTGGCCTTTACGTTATCGATGGTGTCTGAGGACTCGACCTCGAGGGTGATGGTC 71575 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 71574 TTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 71543 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | || |||||| ||||| || || || || || | |||||| || | | ||| Sbjct 71991 CGGAGACGCAAGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAAAGAGTG 71932 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || | ||||| ||||||||||| || || ||||||||||| || ||||| Sbjct 71931 CGACCGTCCTCCAATTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAGGGATACCC 71872 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| |||||| ||||| || || |||| || || || | Sbjct 71871 TCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATAGTATCGGAGGACTCGACCTCGAGA 71812 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| |||||||| ||||| || || | ||| | |||||| Sbjct 71811 GTGATGGTCTTGCCGGTCAACGTCTTAACGAAGATCTGCATT 71770 Score = 84.2 bits (92), Expect = 5e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| || || || || || || || |||| ||||| || | | ||| Sbjct 71535 CGAAGACGAAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCTGAAAGAGTA 71476 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 | || || || |||||||||||||||||||| || || ||||||||||| ||||| Sbjct 71475 CGTCCGTCCTCGAGCTGCTTCCCAGCGAAGATGAGACGCTGTTGGTCGGGAGGAAT 71420 >seq19 Length=654644 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564 ||||| || || || || || || || | ||||||||| | | ||| | || || || Sbjct 380975 ACAAGATGCAGCGTCGACTCCTTCTGAATATTGTAATCAGAAAGAGTGCGGCCGTCCTCG 380916 Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624 || ||||| || ||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct 380915 AGTTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCTTGA 380856 Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684 ||||| |||||| ||||| || || || | || || || |||| ||||| Sbjct 380855 ATCTTCGCCTTCACGTTGTCGATCGTATCCGATGACTCGACCTCAGGGGTGACGGTCTTC 380796 Query 225685 CCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||| || || | ||| | ||||| Sbjct 380795 CCGGTCAGCGTCTTGACGAAAATCTGCAT 380767 >seq3 Length=1836714 Score = 89.7 bits (98), Expect = 1e-12 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || |||||||| || || |||| ||||| ||| | ||| | || ||| Sbjct 1110424 AGGACCAAATGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCGTCT 1110483 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 || || ||||| ||||||||||| || ||||||||||||||||| |||| Sbjct 1110484 TCGAGTTGCTTTCCAGCGAAGATTAGACGTTGTTGGTCGGGCGGGATAC 1110532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528663635204