Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq10 140 5e-28 >seq10 Length=1059423 Score = 140 bits (154), Expect = 5e-28 Identities = 266/390 (68%), Gaps = 5/390 (1%) Strand=Plus/Minus Query 48162 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTT 48221 || |||||||||| || | || || || || || || || || | || ||| || || Sbjct 593706 CCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCGCGCTTC 593647 Query 48222 TTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAAT 48281 |||||||| ||||||| ||||| |||||||||||||||||||| |||||||| || ||| Sbjct 593646 TTGAGCCAGAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAAT 593587 Query 48282 GCGGTAAGTCTCTCTCCGTAACTGGCTTCGTT----GTGTATCCACCGTTGTGCCCAATC 48337 || || | | || ||| ||||| | |||||| || | ||||| || Sbjct 593586 GCAACGAGGCGTGCAGCG-AACGAAGATCGTTTGTCTTCTATCCATCGAAGAGCCCATTC 593528 Query 48338 AGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATT 48397 ||||| | ||| | ||| || || ||||| || |||| || || | |||||| Sbjct 593527 TGCCTTTTGCTTGATACATGGTATAGTTTCGATGGCATCGAATAGGTGCTGGCGTTCATT 593468 Query 48398 GCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAAT 48457 ||||| | || ||||| || | | | ||| | || || || |||||||| || Sbjct 593467 CGGCTCTTTGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCCAT 593408 Query 48458 TGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCG 48517 || || |||||||| ||||| | ||||||| || || || || | | || || Sbjct 593407 CATTATTTGGAATCCGTAGAAACAGCGAGCTTCTGCGACTTGGACTTCGCTTGAGAAGCG 593348 Query 48518 TTCAGCCAAATTCTCATTTACTATTCCATC 48547 |||| | | |||||||| || || ||||| Sbjct 593347 TTCAACGAGGTTCTCATTGACGATGCCATC 593318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667358562240