Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq10 141 1e-28 >seq10 Length=1059423 Score = 141 bits (156), Expect = 1e-28 Identities = 267/391 (68%), Gaps = 5/391 (1%) Strand=Plus/Minus Query 46650 GCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTT 46709 ||| |||||||||| || | || || || || || || ||||| | || ||| ||||| Sbjct 593707 GCCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCGCGCTT 593648 Query 46710 TTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAA 46769 |||||||| ||||| | ||||| |||||||||||||||||||| ||||| || ||||| Sbjct 593647 CTTGAGCCAGAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAA 593588 Query 46770 TGCGACAAGTCTCTCTCCGTAACTGGCATCATT----ATGAATCCACCTTTGAGCCCAAT 46825 ||| || || | | || ||| ||| || | ||||| | ||||||| | Sbjct 593587 TGCAACGAGGCGTGCAGCG-AACGAAGATCGTTTGTCTTCTATCCATCGAAGAGCCCATT 593529 Query 46826 CAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCAT 46885 | ||||||| ||| | ||| || || ||||| || |||| || || | ||||| Sbjct 593528 CTGCCTTTTGCTTGATACATGGTATAGTTTCGATGGCATCGAATAGGTGCTGGCGTTCAT 593469 Query 46886 CACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAA 46945 ||||| | ||| ||||| || | | | ||| | || ||||| || ||||| | Sbjct 593468 TCGGCTCTTTGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCCA 593409 Query 46946 TAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATC 47005 | || || |||||||| ||||| | ||||| | | || || || | | || | Sbjct 593408 TCATTATTTGGAATCCGTAGAAACAGCGAGCTTCTGCGACTTGGACTTCGCTTGAGAAGC 593349 Query 47006 GTTCAGACAAATTCTCATTCACTATTCCATC 47036 ||||| | |||||||| || || ||||| Sbjct 593348 GTTCAACGAGGTTCTCATTGACGATGCCATC 593318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932920661120