Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq20 161 2e-34 seq19 140 8e-28 seq3 87.8 4e-12 >seq20 Length=97954 Score = 161 bits (178), Expect = 2e-34 Identities = 160/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || || |||||||||||||| || ||||||| Sbjct 71546 CAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCAGAC 71605 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| || ||||| || || |||||||| ||||| || Sbjct 71606 ACCATCGATAACGTAAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCAACAG 71665 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| ||||| || || || || | |||||| | || || ||| || Sbjct 71666 CGTCTCATCTTCGCCGGTAAACAACTGGAGGACGGCCGCACTCTTTCTGACTACAACATC 71725 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || || ||||| ||| Sbjct 71726 CAGAAGGAATCCACCCTCCATCTCGTT 71752 Score = 120 bits (132), Expect = 7e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || || ||||| |||||||| || ||| || Sbjct 71774 CAGATCTTCGTTAAGACGTTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCCGAT 71833 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||||||||| || || |||||||| ||||| || Sbjct 71834 ACTATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAACAG 71893 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || || | || || || | |||||| | || || || | Sbjct 71894 CGCCTCATCTTCGCTGGCAAGCAATTGGAGGACGGTCGCACTCTTTCTGACTACAATATT 71953 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || |||||||| ||| | ||| Sbjct 71954 CAGAAGGAGTCGACGCTCCATCTTGTCTTGCGTCTC 71989 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| ||||| || ||||||||||||||||| || || Sbjct 71255 CAAATCTTCGTCAAGACCCTCACTGGAAAGACTATCACCCTCGAGGTGGAGTCGTCCGAT 71314 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| |||||||| ||||| |||||||| || || Sbjct 71315 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGG 71355 >seq19 Length=654644 Score = 140 bits (154), Expect = 8e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || || || || |||||| ||||| || || || Sbjct 380770 CAGATTTTCGTCAAGACGCTGACCGGGAAGACCGTCACCCCTGAGGTCGAGTCATCGGAT 380829 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||| ||||| || || |||||||| |||||||| Sbjct 380830 ACGATCGACAACGTGAAGGCGAAGATTCAAGACAAGGAGGGTATCCCTCCCGACCAGCAG 380889 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || || ||||| || || | |||||| | ||||| || | Sbjct 380890 CGCCTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCTGATTACAATATT 380949 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || ||||||||||| ||| Sbjct 380950 CAGAAGGAGTCGACGCTGCATCTTGTGTTG 380979 >seq3 Length=1836714 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || || || || |||||||| |||||||| ||| ||| Sbjct 1110735 CAAATCTTCGTCAAGACCCTAACGGGGAAGACTATCACCCTTGAGGTGGAGTCCTCCGAC 1110676 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || ||||| || ||||||||||||||||| Sbjct 1110675 ACCATCGACAATGTCAAGGCCAAAATTCAGGACAAAGAAGG 1110635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203728639814204