Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq20 147 2e-30 seq19 147 2e-30 seq8 95.1 1e-14 >seq20 Length=97954 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| ||||| || || ||||| ||||| |||||||||||| || ||||| || Sbjct 71997 CCGCCGCGGAGACGCAAGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAA 71938 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || | |||||||| ||||| || |||||||||||||| | || Sbjct 71937 AGAGTGCGACCGTCCTCCAATTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAGGG 71878 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || || | ||| | | | ||| ||| ||||| || Sbjct 71877 ATACCCTCCTTGTCC-TGAATCTTCGCCTTCACGTTGTCGATAGTATCGGAGGACTCGAC 71819 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || |||| |||||| ||||| |||||||| Sbjct 71818 CTCGAGAGTGATGGTCTTGCCGGTCAACGTCTTAACGAAGATCTGCAT 71771 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || ||||| || ||| |||||||| ||||| ||||| || Sbjct 71769 CCACCGCGGAGACGGAGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 71710 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || || || || |||||||| || || ||||||||||| | || Sbjct 71709 AGAGTGCGGCCGTCCTCCAGTTGTTTACCGGCGAAGATGAGACGCTGTTGGTCGGGAGGG 71650 Query 41756 ACGCTCTCCTTGTCCATGATTT-----TTTGCTTCAACGACGACACAGTGTCGCTCGACT 41810 | || ||||||||| ||| | ||| | | | ||| | ||||| |||| Sbjct 71649 ATGCCCTCCTTGTCTTGGATCTTGGCCTTTACGTTATCGATG-----GTGTCTGAGGACT 71595 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||| | || || || || || || || ||||| ||||| |||||||| Sbjct 71594 CGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 71543 Score = 100 bits (110), Expect = 3e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || ||||| ||||| ||||||||| ||||| ||||| || Sbjct 71541 CCACCGCGAAGACGAAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCTGAA 71482 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| ||||||||||| || ||||| || || ||||||||||| | ||| Sbjct 71481 AGAGTACGTCCGTCCTCGAGCTGCTTCCCAGCGAAGATGAGACGCTGTTGGTCGGGAGGA 71422 Query 41756 ACGCT 41760 | ||| Sbjct 71421 ATGCT 71417 >seq19 Length=654644 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| ||||| ||||| ||||||||||| |||||||||||| || || || || Sbjct 380993 CCGCCGCGCAGACGCAACACAAGATGCAGCGTCGACTCCTTCTGAATATTGTAATCAGAA 380934 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| ||||| |||||||||||||| || |||||||| ||||| | || Sbjct 380933 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGG 380874 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | ||| | || || | ||| | | | || || ||||| || Sbjct 380873 ATACCCTCCTTGT-CTTGAATCTTCGCCTTCACGTTGTCGATCGTATCCGATGACTCGAC 380815 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || | || || || ||||||||||| |||||||||||||| Sbjct 380814 CTCAGGGGTGACGGTCTTCCCGGTCAGCGTCTTGACGAAAATCTGCAT 380767 Score = 98.7 bits (108), Expect = 9e-16 Identities = 95/121 (79%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| || || ||||||| || || || ||||||||| || || ||||| ||| Sbjct 380765 CCGCCGCGAAGGCGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCCGAG 380706 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 ||||||||| | || || || ||||| |||||||| || ||||| ||||| || ||||| Sbjct 380705 AGGGTGCGCCCATCCTCCAGTTGCTTCCCGGCGAAGATGAGGCGTTGTTGATCGGGCGGG 380646 Query 41755 A 41755 | Sbjct 380645 A 380645 >seq8 Length=1233415 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || ||||||||| ||||| |||||| Sbjct 1004500 CCACCACGGAGACGGAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTC 1004441 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || |||||||||||||| ||||| || ||||||||||| || | |||| Sbjct 1004440 AAGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGATCGGGGGGA 1004381 Query 41756 ACGCT 41760 | ||| Sbjct 1004380 ATGCT 1004376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303040719200