Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1750 127 4e-24 seq2454 96.9 7e-15 >seq1750 Length=1054334 Score = 127 bits (140), Expect = 4e-24 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 230428 GACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGA 230486 |||||| |||| ||| | || || ||||||||||| | || ||| | |||||||| || Sbjct 416115 GACGCTCTTCCC-GTCTCGCTCATCGGCATGAACGCGAAGCTCATGTGCCAGTACATTGA 416173 Query 230487 ATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAA 230546 |||||| || || || | |||| | ||||| |||| || |||||||| || | ||| Sbjct 416174 ATTCGTGGCTGATCGTCTCCTTGTATCCCTTGGCAACGACAAGGTGTACAATTCGACGAA 416233 Query 230547 CCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCG 230606 ||||| | || ||||| | || ||||| || || ||||| ||||||||||||||||| Sbjct 416234 TCCCTTCGACTTCATGGACATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAAAAGCG 416293 Query 230607 TGTCAGTGACTA 230618 ||| |||||| Sbjct 416294 CGTCTCTGACTA 416305 >seq2454 Length=432705 Score = 96.9 bits (106), Expect = 7e-15 Identities = 202/299 (68%), Gaps = 4/299 (1%) Strand=Plus/Plus Query 61089 CAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAAGGACT 61148 || ||||||||||| || |||| || || || || | || |||| || | ||| Sbjct 169581 CAGGCATCAACATCAGAGTTGTACGGCAAGGTCGTGGAGACGCCGCAAAGCGAGACGACG 169640 Query 61149 CCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGGAT--TTGTA 61206 || || |||||||||||||| || || || || | ||||| || ||||| | || Sbjct 169641 CCCTTCTATCCTCGTAGCCCTTACGGGTGCGCCAAGTTGTACGCGTATTGGATAGTGGT- 169699 Query 61207 AAAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAATCACGAGA 61266 ||||| || ||| ||||||| ||||| | || || ||| | ||||| ||||||| Sbjct 169700 -CAATTATCGGGAGGCGTATGGGATGTTCGCGTGCAATGGGATATTGTTCAACCACGAGA 169758 Query 61267 GTCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGCAAATATTT 61326 | |||| |||| | || || || || || ||||| | ||| | || |||| | Sbjct 169759 GCCCCAGACGAGGGCGGACTTTCGTCACACGGAAGATTACAAGGGCTGCGGCTGATATCT 169818 Query 61327 TTAACGGTGTCGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGA 61385 || ||| ||| ||||||| |||||| | ||| || || ||||||||||| Sbjct 169819 CCTTGGGAAAGCAAAGCTGCCTGTATCTGGGAAACTTGGACGCTCAACGAGATTGGGGA 169877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057789723527270