Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1750 156 4e-33 >seq1750 Length=1054334 Score = 156 bits (172), Expect = 4e-33 Identities = 385/581 (66%), Gaps = 5/581 (1%) Strand=Plus/Plus Query 16941 GTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGA 17000 |||| || || |||||| || || ||||| ||| || | ||||| ||||| | || Sbjct 413624 GTTTCAGGTGAGTAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGA 413683 Query 17001 TAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCG 17060 | || || || || || || | || || | ||| || ||||| | ||||||||| | Sbjct 413684 TGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCACGCTTCTTGAGCCAAAATATTG 413743 Query 17061 CGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGG 17120 |||||||| |||||||||||||| ||||| |||| || || || | | ||| | | Sbjct 413744 AAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTACAG 413803 Query 17121 CGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGC 17180 || | | | ||||| |||||| | |||| || || |||||||| || | Sbjct 413804 CGAATGAAGATCGTTTGTCTTCTATCCATCGGAGAGCCCATTCTGCCTTTTGCTTGATAC 413863 Query 17181 AATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACG 17240 | || ||||| ||||| | |||| | || ||| | | || | ||||| | Sbjct 413864 ATGGTATGGTTTCAATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGG 413923 Query 17241 TATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGT 17300 |||| ||||| | || | || || ||||| || ||||| ||| || ||||||| Sbjct 413924 TATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGT 413983 Query 17301 AAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGT 17360 | || || || ||||| || | ||| ||||| |||| ||||| | || || || | Sbjct 413984 AGAAACAGCGCGCTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACAAGGTTCTCAT 414043 Query 17361 TCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGT 17420 | |||||||| || ||| ||||| || || | || | ||||| || ||| | Sbjct 414044 TGACGATGCCATCCGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCAT 414103 Query 17421 C--CGGTGTAA--GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGG 17476 | |||| ||| ||| ||||||| | | ||||| || | ||| | |||||| | Sbjct 414104 CGTCGGT-TAATCGAAGATTCCAGTCCATCCAGTCTTTAGAGAGATCAATCTCTTCGACG 414162 Query 17477 GTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 ||||||||| |||| |||| || ||||| | ||| || Sbjct 414163 GTCCAAAAAGAAGCCTGCGCCTGCTTGTACATCTGCCATAT 414203 Score = 120 bits (132), Expect = 3e-22 Identities = 294/446 (66%), Gaps = 0/446 (0%) Strand=Plus/Minus Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005 ||||| | || | ||| || ||||| ||| || | |||||||| | ||||| || Sbjct 415986 AGATGGCTGAAAAGCAGGCAAGCGAAGTCGGTGTGCATGCCCTCGTCACGACTGATGAGC 415927 Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065 ||||| || || || | || ||||| || || ||||| ||||| || || | |||| Sbjct 415926 TCGTTGGAGAAAGTAAGACCAGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGAGGCG 415867 Query 17066 AACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTAC 17125 || || || || ||||| ||||||||||| | || || || | | || || || | Sbjct 415866 AATGAACCTGAGAAGAAGATACCCTCGACAGCGGCGAAGGCAACGAGACGCTCAGCAAAT 415807 Query 17126 GTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCC 17185 |||| | | || ||||||| | |||||||||| || |||| || || Sbjct 415806 GTCGATTGCTGGTCTGAAATCCATCGAAGAGCCCACTCGGCCTTGCGCTTGATACAGGGG 415747 Query 17186 ATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCG 17245 || ||||| || || | ||| | | || || | || | || || || ||| Sbjct 415746 ATAGTTTCGATAGCGTCAAAGAGGTAGTCGCGCTCGGCAATATCCTTGATGTAGGTGTCG 415687 Query 17246 ATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAG 17305 || | | || | || ||||| ||||||||||| |||||| || ||||| ||| Sbjct 415686 ATCAACAATGAATAGGTCTCAGAGTGGATGTTCTCCATCATTATCTGGAAACCGTAGAAG 415627 Query 17306 CATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACG 17365 || || || || || | ||| ||||| |||| ||||| | || |||||||| || Sbjct 415626 CAGCGAGCCTCAGCGACTTGCACTTCGTTCGAGAAACGTTCGACGAGGTTTTCGTTGACA 415567 Query 17366 ATGCCGTCGCTCGCGGCGAAAAACGC 17391 ||||| || |||||||| || || Sbjct 415566 ATGCCATCCGAAGCGGCGAAGAAAGC 415541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517529239089720