Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1750 118 1e-21 >seq1750 Length=1054334 Score = 118 bits (130), Expect = 1e-21 Identities = 287/432 (66%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 16181 TTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATA 16240 || ||||| |||||| || || ||||| ||| || | || || ||||| | ||| Sbjct 413626 TTCAGGTGAGTAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATG 413685 Query 16241 AGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCA 16300 || || ||||| || || | || || | | ||| || ||||| | ||| ||||| | | Sbjct 413686 AGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCACGCTTCTTGAGCCAAAATATTGAA 413745 Query 16301 GCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCG 16360 || || || || ||||||||||| ||||| || | || || || | | ||| | ||| Sbjct 413746 GCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTACAGCG 413805 Query 16361 TACGTAGCATC-TTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACA 16419 | | || ||| ||| | |||||| | ||||||| || ||||| || ||||| Sbjct 413806 AATGAAG-ATCGTTTGTCTTCTATCCATCGGAGAGCCCATTCTGCCTTTTGCTTGATACA 413864 Query 16420 ATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGT 16479 || ||||| ||||| | || | | || ||| | || | ||||| || Sbjct 413865 TGGTATGGTTTCAATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGT 413924 Query 16480 ATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATA 16539 |||||| || | | || | || || ||||| || || || ||| || ||||| || Sbjct 413925 ATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTA 413984 Query 16540 GAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATT 16599 ||| || || || || || | ||| ||||| | || ||||| | ||||||||||| Sbjct 413985 GAAACAGCGCGCTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACAAGGTTCTCATT 414044 Query 16600 CACGATACCGTC 16611 ||||| || || Sbjct 414045 GACGATGCCATC 414056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511398232912280