Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1750 147 3e-30 >seq1750 Length=1054334 Score = 147 bits (162), Expect = 3e-30 Identities = 376/568 (66%), Gaps = 6/568 (1%) Strand=Plus/Plus Query 24124 TAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGG 24183 |||||| | || ||||| ||| ||| | ||||| ||||||| || | || |||| Sbjct 413636 TAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGG 413695 Query 24184 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATC 24243 | || || || || || | || |||||||| || ||||||||||| || || || |||| Sbjct 413696 AGAAGGTAAGGCCAGGTAGTAATCCACGCTTCTTGAGCCAAAATATTGAAGCGAACGATC 413755 Query 24244 CAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAACCGGC 24301 |||||||||| || || ||||| || || || |||| || | | | | || | | Sbjct 413756 CAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTACAGCGAATGAAGATC 413815 Query 24302 G-CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 24360 | |||| | |||||| ||||||| || ||||| | || | ||| || || || | Sbjct 413816 GTTTGTCTTCTATCCATCGGAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATGGTTT 413875 Query 24361 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 24420 | || |||| || || | | |||||| ||||| | ||| |||||||| | | Sbjct 413876 CAATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGCA 413935 Query 24421 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 24480 | ||| | |||||||| || ||||| || ||||| |||||||||||||| | | Sbjct 413936 TAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGCG 413995 Query 24481 CCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 24540 | || | | || ||||| | | || ||||| | | || ||||| || || || | Sbjct 413996 CTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACAAGGTTCTCATTGACGATGCCAT 414055 Query 24541 CACTGGCTGCAAAAAACGCCA--ATACATGTTTTATAAAAT-ATTTTTCGTCTGGTGTTA 24597 | || || || || || | || | | | | ||| || ||||| | | | Sbjct 414056 CCGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAATC 414115 Query 24598 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 24657 | |||||| || | |||||||| | ||| | ||||| || |||||||| || | Sbjct 414116 GAAGATTCCAGTCCATCCAGTCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAGAAG 414175 Query 24658 CCTCTGCCTTTTTATACATATTCCAGAT 24685 ||| |||| || ||||| | ||| || Sbjct 414176 CCTGCGCCTGCTTGTACATCTGCCATAT 414203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593702830975920