Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2481 134 1e-26 seq2476 131 1e-25 seq190 122 8e-23 seq2468 116 3e-21 seq2467 114 1e-20 seq2407 84.2 2e-11 >seq2481 Length=1366164 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 |||||||| | | | || | ||||| |||||||| || || ||||||||||| Sbjct 516601 CCTCCGCGGAGACGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGAA 516660 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| ||| ||||| || || || ||| |||| || ||||| ||||||||||| Sbjct 516661 AGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAGGA 516720 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || |||||||| ||| || ||| || | |||| |||||| | | ||||||| Sbjct 516721 ATTCCTTCCTTGTCCTGAATCTTGGCTTTCACGTTATCGATGGTGTCGGAGGACTCGACC 516780 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || | ||| ||||| |||| ||| || || || |||||||| Sbjct 516781 TCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAGATCTGCAT 516827 >seq2476 Length=877278 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | || || | ||||| || ||||| || || |||||||| || Sbjct 851248 CCGCCGCGAAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAA 851189 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| |||||||| || || || ||| ||||||| ||||| || |||||||| Sbjct 851188 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGAGGG 851129 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690 |||||||||||||| ||| || || || | |||| |||||||| || | ||||| Sbjct 851128 ATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTATCGATGGTGTCCGATGAT-TCGAC 851070 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||||| ||| | || ||||| ||||| || || || || ||||||||| Sbjct 851069 CTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTAACGAAGATCTGCATG 851021 >seq190 Length=61660 Score = 122 bits (134), Expect = 8e-23 Identities = 153/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| || ||||| || ||||| ||||| || | ||| || |||||||| Sbjct 9965 CAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAAAGAGTACGGCCATCCTCGA 10024 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 | ||||| || ||| |||||||||||||||| | |||||| || ||||||||||| || Sbjct 10025 GTTGTTTGCCGGCGAAGATGAGACGCTGCTGGTTGGGAGGGATACCCTCCTTGTCCTGAA 10084 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | |||| |||||||| | ||| || |||| || | || |||| Sbjct 10085 TCTTCGCCTTGACATTATCGATGGTGTCCGAGGACTCAACTTCGAGAGTGATGGTCTTGC 10144 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCATG 118739 | || || || || || || ||||||||| Sbjct 10145 CAGTGAGGGTCTTCACGAAGATCTGCATG 10173 Score = 89.7 bits (98), Expect = 4e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | |||||||| ||| | || ||||| || ||||||||||| ||| Sbjct 10174 CCACCGCGAAGGCGCAACACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAG 10233 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || | ||||||||||| || |||||| |||||||||| ||||| |||||||| Sbjct 10234 AGGGTACATCCGTCCTCGAGCTGCTTCCCAGCGAAGATGAGACGTTGCTGGTCGGGAGGG 10293 Query 118632 ATGC 118635 |||| Sbjct 10294 ATGC 10297 >seq2468 Length=587188 Score = 116 bits (128), Expect = 3e-21 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||||| || ||||||||||| ||||||| ||||| |||||| Sbjct 315081 CACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAAGGTGCGGCCATCCTC 315140 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 ||||||||| |||||| ||||||| |||||||||||||| || |||| Sbjct 315141 GAGCTGTTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGGGGAATGC 315187 >seq2467 Length=211848 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | ||| || | |||| || ||||| || || |||||||| || Sbjct 155868 CCGCCGCGAAGACGCAAGACAAGATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAG 155809 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| ||||||||||| || || || ||||||| ||||| ||||||||||| Sbjct 155808 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGAGGG 155749 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 |||||||||||||| || || || || | |||| ||||| | | ||||||| Sbjct 155748 ATGCCCTCCTTGTCCTGGATCTTCGCCTTTACGTTGTCGATCGTGTCGGAGGACTCGACC 155689 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | ||| | || ||||| || || || || || || ||||||||| Sbjct 155688 TCCAGGGTGATGGTCTTGCCAGTAAGCGTCTTCACGAAGATCTGCATG 155641 >seq2407 Length=893 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 118546 ACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGT 118605 |||| || |||||||| || || | ||||||| ||| ||||| || || || ||| Sbjct 140 ACTCCTTCTGAATGTTTTAGTCAGAAAGAGTGCGCCCATCTTCGAGTTGCTTGCCGGCGA 81 Query 118606 AGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCT 118641 ||||||||||||| || |||||||| |||||||||| Sbjct 80 AGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCT 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433817028398068