Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq190 102 9e-17 seq2481 96.9 4e-15 >seq190 Length=61660 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||||||||| |||| ||||| || | || || || || || || ||||| Sbjct 9981 CTCCTTCTGAATATTGTAGTCAGAAAGAGTACGGCCATCCTCGAGTTGTTTGCCGGCGAA 10040 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| |||||||||| || || | | |||||||||| ||| | || | |||| Sbjct 10041 GATGAGACGCTGCTGGTTGGGAGGGATACCCTCCTTGTCC-TGAATCTTCGCCTTGACAT 10099 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || |||| |||||||| ||||| || || ||||| | Sbjct 10100 TATCGATGGTGTCCGAGGACTCAACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCA 10159 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 10160 CGAAGATCTGCAT 10172 >seq2481 Length=1366164 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 42974 CACCAAA-TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCAT 43032 |||||| |||| ||| |||||| || || |||||||||| || |||| | || | Sbjct 516161 CACCAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGCGTCCTGCCATCCT 516220 Query 43033 CTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCA 43092 | | |||||| ||||| || || | ||||| ||||| | || | | |||||| ||| Sbjct 516221 CCAACTGCTTGCCAGCAAAGATCAAGCGCTGTTGGTCAGGTGGGATCCCCTCCTTATCC- 516279 Query 43093 TGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 43151 ||| | || | |||| | | | ||||| |||||| || |||| |||||||| Sbjct 516280 TGAATCTTGGCCTTGACATTGTCGATGGTGTCTGACGATTCAACTTCGAGGGTGATGGTC 516339 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||||| | ||||| || ||||||||||| Sbjct 516340 TTGCCCGTCAAAGTCTTCACGAAGATTTGCAT 516371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571799523416120