Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq2467 122 6e-23 seq2476 113 3e-20 seq2481 95.1 8e-15 seq190 95.1 8e-15 >seq2467 Length=211848 Score = 122 bits (134), Expect = 6e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 || |||||||| || | || || || || | || || ||||| ||||||||||| Sbjct 155871 AACCCGCCGCGAAGACGCAAGACAAGATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCC 155812 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 || || ||| |||| || | ||||||||| || || ||||| ||||| || ||| Sbjct 155811 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGA 155752 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | || ||||||||| ||||| ||||| | | | |||| |||| || ||| Sbjct 155751 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTTACGTTGTCGATCGTGTCGGAGGACTCG 155692 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||| |||||||| ||||| || || || ||||| ||||||||||| Sbjct 155691 ACCTCCAGGGTGATGGTCTTGCCAGTAAGCGTCTTCACGAAGATCTGCAT 155642 >seq2476 Length=877278 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 || |||||||| || | ||| || ||||| | || || ||||| ||||||||||| Sbjct 851251 AACCCGCCGCGAAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCA 851192 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 || || ||| |||| || | |||||||| ||||| ||||| ||||| |||||| Sbjct 851191 GAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGA 851132 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | || ||||||||| ||||| ||| | | | || | || | |||||| Sbjct 851131 GGGATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTATCGATGGTGTCCGATGATTCG 851072 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | |||||||| ||||| || || || || || ||||||||||| Sbjct 851071 ACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTAACGAAGATCTGCAT 851022 >seq2481 Length=1366164 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || || || | |||| ||| ||||| ||||| ||||| ||| Sbjct 516373 CCACCACGCAGACGAAGGACGAGATGAAGAGTAGATTCCTTCTGAATGTTATAGTCCGAC 516432 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | || | || ||||||||||| || |||||||| | || || ||||| || Sbjct 516433 AATGTGCGACCATCCTCCAACTGCTTTCCAGCGAAAATCAAACGTTGTTGGTCAGGTGGA 516492 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| |||||| ||| | | | | || | |||| || || || Sbjct 516493 ATTCCTTCCTTGTCTTGGATCTTTGCCTTAACGTTGTCGATTGTGTCGGAAGACTCAACC 516552 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || |||||||| || || |||||||||||||| Sbjct 516553 TCGAGGGTGATAGTCTTTCCGGTGAGGGTCTTGACAAAGATCTGCAT 516599 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 34180 CACCA-GGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGT 34238 ||||| |||| | ||| || ||||| |||||||| || || ||| | | | || | Sbjct 516161 CACCAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGCGTCCTGCCATCCT 516220 Query 34239 CCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGG 34298 ||||||||||||| || || || | ||||| ||||| || | | |||||| || Sbjct 516221 CCAACTGCTTGCCAGCAAAGATCAAGCGCTGTTGGTCAGGTGGGATCCCCTCCTTATCCT 516280 Query 34299 CTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTT 34358 ||||| ||| | || | | || | || | |||||| || || | |||||||| | Sbjct 516281 GAATCTTGGCCTTGACATTGTCGATGGTGTCTGACGATTCAACTTCGAGGGTGATGGTCT 516340 Query 34359 TGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || | ||| ||||| ||||| ||||| Sbjct 516341 TGCCCGTCAAAGTCTTCACGAAGATTTGCAT 516371 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | |||| || ||||| |||||||| || || Sbjct 516601 CCTCCGCGGAGACGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGAA 516660 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | |||||||| ||||| || || ||||| || ||| || Sbjct 516661 AGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAGGA 516720 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| ||||| ||||| | | | || | |||| || ||||| Sbjct 516721 ATTCCTTCCTTGTCCTGAATCTTG-GCTTTCACGTTATCGATGGTGTCGGAGGACTCGAC 516779 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||| || | ||| ||||| ||||||||||| Sbjct 516780 CTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAGATCTGCAT 516827 >seq190 Length=61660 Score = 95.1 bits (104), Expect = 8e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 ||||| ||||| || | || || || || | || || ||||| || |||||||| Sbjct 9943 AATCCACCGCGAAGACGGAGGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCA 10002 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 || || |||| | || || | || ||||| ||||| ||||| |||||||||| | Sbjct 10003 GAAAGAGTACGGCCATCCTCGAGTTGTTTGCCGGCGAAGATGAGACGCTGCTGGTTGGGA 10062 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | | ||||||||| ||||| ||| | || | || | || | || || Sbjct 10063 GGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACATTATCGATGGTGTCCGAGGACTCA 10122 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | |||||||| ||||| ||||| || ||||| ||||||||||| Sbjct 10123 ACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 10172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323062042214240