Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1750 105 6e-18 >seq1750 Length=1054334 Score = 105 bits (116), Expect = 6e-18 Identities = 367/571 (64%), Gaps = 9/571 (2%) Strand=Plus/Plus Query 16224 TAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTG 16283 |||||| | ||||| || || |||| || || || |||| || | ||| || | Sbjct 413636 TAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGG 413695 Query 16284 AAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAAC 16343 | || ||||| || || | || ||| || || || | ||||||||| | || || || | Sbjct 413696 AGAAGGTAAGGCCAGGTAGTAATCCACGCTTCTTGAGCCAAAATATTGAAGCGAACGATC 413755 Query 16344 CAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAt 16403 ||||||||||||| || || || || || |||||||| | || || || | | Sbjct 413756 CAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTACAGCGAATGAAGATC 413815 Query 16404 ttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCT 16463 ||| |||||||||| |||||| | ||| ||||| || | ||| ||| | | Sbjct 413816 GTTTGTCTTCTATCCATCGGAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATGGTTT 413875 Query 16464 CTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTA 16523 | || |||| |||| | | ||| || ||| ||||| ||||| || || | Sbjct 413876 CAATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGCA 413935 Query 16524 AACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAG 16583 | ||| | || ||||| ||||| ||||| ||| || || || || || || | | Sbjct 413936 TAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGCG 413995 Query 16584 CTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCAT 16643 |||| | | ||| ||||| | || | ||| | | ||| || || || || |||| Sbjct 413996 CTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACAAGGTTCTCATTGACGATGCCAT 414055 Query 16644 CGCTAGCTGCAAAAAACGCAAGTAT----GTGTTTAATAAAAttt--ttttCGTTATCTG 16697 | || || || || || || || | | | || || || | ||| | | Sbjct 414056 CCGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAATC 414115 Query 16698 AAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAG 16757 ||| || |||||| | ||||| || | ||| | |||||| || |||||||||| Sbjct 414116 GAAGATT---CCAGTCCATCCAGTCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAG 414172 Query 16758 AAGCAACAGCCTTTTTATACATTTTCCATAT 16788 |||| |||| || ||||| | |||||| Sbjct 414173 AAGCCTGCGCCTGCTTGTACATCTGCCATAT 414203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462497378839400