Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq2476 118 8e-22 seq190 104 2e-17 seq2481 98.7 8e-16 seq2520 84.2 2e-11 >seq2476 Length=877278 Score = 118 bits (130), Expect = 8e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| ||||||||||| || ||| |||| || ||||| Sbjct 851225 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCCTCGAGTTG 851166 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| || | ||||||||||||||||| | |||||||||||| ||| || Sbjct 851165 CTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTT 851106 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | ||||| || ||||| | ||| || |||||||| || Sbjct 851105 CGCCTTGACGTTATCGATGGTGTCCGATGATTCGACCTCGAGGGTGATGGTCTTGCCAGT 851046 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 ||| ||||| || ||||| |||||| Sbjct 851045 CAGCGTCTTAACGAAGATCTGCATG 851021 >seq190 Length=61660 Score = 104 bits (114), Expect = 2e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || ||||| |||||||||||| |||||||| || || | || || | Sbjct 9965 CAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAAAGAGTACGGCCATCCTCGA 10024 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 ||||||| |||||||| || | ||||| |||| |||||| | ||||||||||||| || Sbjct 10025 GTTGTTTGCCGGCGAAGATGAGACGCTGCTGGTTGGGAGGGATACCCTCCTTGTCCTGAA 10084 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | ||||| ||| || || | || || ||||||| Sbjct 10085 TCTTCGCCTTGACATTATCGATGGTGTCCGAGGACTCAACTTCGAGAGTGATGGTCTTGC 10144 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337 | || || |||||||| ||||| |||||| Sbjct 10145 CAGTGAGGGTCTTCACGAAGATCTGCATG 10173 >seq2481 Length=1366164 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||||||||| ||||| || | |||| | || |||| || ||||| ||||| Sbjct 516409 TCCTTCTGAATGTTATAGTCCGACAATGTGCGACCATCCTCCAACTGCTTTCCAGCGAAA 516468 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 ||||| || |||||||| || || | || |||||||| || ||| |||||| Sbjct 516469 ATCAAACGTTGTTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTTTGCCTTAACGTTG 516528 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | |||| | ||| ||||| | ||| || ||||| || || || ||||| ||| Sbjct 516529 TCGATTGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTTCCGGTGAGGGTCTTGACA 516588 Query 45326 AAGATTTGCATG 45337 ||||| |||||| Sbjct 516589 AAGATCTGCATG 516600 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 45128 ACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 |||||| ||||| ||| ||||||||| |||||||| || || | | || || Sbjct 516162 ACCAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGCGTCCTGCCATCCTC 516221 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || || || || || || ||||| ||||||||||| || || | |||||||| ||| Sbjct 516222 CAACTGCTTGCCAGCAAAGATCAAGCGCTGTTGGTCAGGTGGGATCCCCTCCTTATCCTG 516281 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 ||| || ||| || | | | |||| || || || | ||| || ||||| Sbjct 516282 AATCTTGGCCTTGACATTGTCGATGGTGTCTGACGATTCAACTTCGAGGGTGATGGTCTT 516341 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| ||||||||| ||||||||||| Sbjct 516342 GCCCGTCAAAGTCTTCACGAAGATTTGCAT 516371 >seq2520 Length=409667 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| ||||||||| |||||||||||| | || |||| |||| || Sbjct 285894 ACCAAATGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGACCGTCTTCG 285835 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 ||||| ||||| ||||| || | || ||||||||||| || Sbjct 285834 AGTTGCTTTCCAGCGAAGATTAGGCGTTGTTGGTCGGGTGG 285794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395063022918109