Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1750 127 2e-24 seq2481 122 8e-23 seq2043 114 1e-20 seq190 96.9 3e-15 >seq1750 Length=1054334 Score = 127 bits (140), Expect = 2e-24 Identities = 299/445 (67%), Gaps = 10/445 (2%) Strand=Plus/Plus Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || |||||||| || ||||| ||||| ||||| || | |||||| | Sbjct 415532 CACGTTCTCGCTTTCTTCGCCGCTTCGGATGGCATTGTCAACGAAAACCTCGTCGAACGT 415591 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | ||||||||||| | ||||| | ||||| ||||| || || | || Sbjct 415592 TTCTCGAACGAAGTGCAAGTCGCTGAGGCTCGCTGCTTCTACGGTTTCCAGATAATGATG 415651 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || | ||||| | | ||||| || ||| | ||||| | | | Sbjct 415652 GAGAACATCCACTCTGAGACCTATTCATTGTTGATCGACACCTACATCAAGGATATTGCC 415711 Query 57867 GAGAAACGTAGA-CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGC 57922 ||| || | || || |||| |||||||| || ||| || |||| ||||| Sbjct 415712 GAG-CGCGACTACCTCTTTGACGCTATCGAAACTATCCCCTGTAT---CAAGCGCAAGGC 415767 Query 57923 AGAGTGGTCAATCAAATGGA-TAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCG 57981 |||||| | | ||||| | | | | || | || || || ||| | || | | Sbjct 415768 CGAGTGGGCTCTTCGATGGATTTCAGACCAGCA-ATCGACATTTGCTGAGCGTCTCGTTG 415826 Query 57982 CGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGA 58041 | |||||||| ||||| ||||| ||||| || || || || | || || ||| ||| Sbjct 415827 CCTTCGCCGCTGTCGAGGGTATCTTCTTCTCAGGTTCATTCGCCTCTATCTTCTGGTTGA 415886 Query 58042 AGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 |||| ||||| || ||||| || || || || ||||||| | || || ||||||| Sbjct 415887 AGAAGCGCGGTCTTATGCCTGGTCTTACTTTCTCCAACGAGCTCATCAGTCGTGACGAGG 415946 Query 58102 GTCTCCATACTGATTTTGCGTGCCT 58126 | | || || || || || ||||| Sbjct 415947 GCATGCACACCGACTTCGCTTGCCT 415971 >seq2481 Length=1366164 Score = 122 bits (134), Expect = 8e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| || || || || || |||||| |||| ||||| | || Sbjct 516600 CATGCAGATCTTTGTCAAGACCCTCACCGGAAAGACTATCACCCTCGAGGTTGAGTCTTC 516541 Query 31252 CGACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||||| |||| |||| | | || ||| | ||||||||||| | || || |||| Sbjct 516540 CGACACAATCGACAACGTTAAGGCAAAGA-TCCAAGACAAGGAAGGAATTCCACCTGACC 516482 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 | || ||| | || |||||||| || |||||||| || | || || || |||| Sbjct 516481 AACAACGTTTGATTTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACATTGTCGGACTATA 516422 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||| || ||||| ||||||||||| || ||| | ||| | || |||| Sbjct 516421 ACATTCAGAAGGAATCTACTCTTCATCTCGTCCTTCGTCTGCGTGGTGGTA 516371 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| ||||| |||||||| |||| || || | ||| Sbjct 516827 ATGCAGATCTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAGGTCGAGTCCTCC 516768 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| | || |||||||||||| | || ||||| || Sbjct 516767 GACACCATCGATAACGTGAAAGCCAAGATTCAGGACAAGGAAGGAATTCCTCCCGATCAA 516708 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| || | ||||| ||| | ||||| ||| Sbjct 516707 CAGCGCCTTATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACTCTTTCTGATTACAAC 516648 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || ||||| || || || || Sbjct 516647 ATCCAGAAGGAGTCTACTCTCCACCTTGTTCT 516616 >seq2043 Length=178294 Score = 114 bits (126), Expect = 1e-20 Identities = 252/372 (68%), Gaps = 13/372 (3%) Strand=Plus/Plus Query 22511 GGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCC 22570 || ||||| | |||||| || ||||||||| || ||||| || ||||| || || Sbjct 126192 GGCTCGAAGCACTCATTGAAGCCAAGTATCTGACTAGTAGAAGCCGTAGGCATAGGAGC- 126250 Query 22571 AACAGT-AGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTC 22629 | || | |||||||| | ||| || ||||| | ||| || ||| | | | |||||| Sbjct 126251 AGCAATGAGCGAGTTCCGCAACCCATGCTTGGCAATCTTCGCCTTCAACGAAGCCCAGTC 126310 Query 22630 CCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGC 22689 ||| ||||| | || || || | ||| | |||||||| | || || || Sbjct 126311 CCAGAGATCCGTAGGGGTGACGCT---CCAGAGGTCGTATTGTAGTTTCCCTTGAGAGGC 126367 Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749 || |||||||||||||| ||||| | || | || | || | ||||||||| ||||| Sbjct 126368 AGGACTGCCTTCGTACGTCTCGTAAGCTCCTTCCTTCTCCGCCATTTCGCAGCTAGCCTC 126427 Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTC---GGCGGC-GGCGA 22805 | || | | ||| |||||||| ||||||| || |||||| || ||| || ||||| Sbjct 126428 GAGACCGGCATGATAGATAGTCTCAAAGATTTGCTGGTTCAACTCTCTGGCAGCGGGCGA 126487 Query 22806 CGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATAC 22865 ||| | || || | | || ||||||||| || | || || || || || | Sbjct 126488 ----ATCGAAGGGGATGCCGAGAGCCATGAACGCGTCAGCGAGGCCTTGCACACCAATGC 126543 Query 22866 CGATCGGTCGGT 22877 |||| || |||| Sbjct 126544 CGATGGGACGGT 126555 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23668 AGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACAT 23727 |||||||||||| || || ||| ||| || || | ||||||||| ||||| | Sbjct 127493 AGTGTCGTAGATTCCATCTATGGAGTCGTCCTTCATGCAGACCAAGAAGCACGAGCTAAG 127552 Query 23728 TTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATT 23787 || | | ||| ||| | || |||||| || || |||||||| ||||||| | Sbjct 127553 CTGTGGGTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCGTGCGTGAAGTATCGCTC 127612 Query 23788 CGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGC 23847 |||||| || ||||| || |||||| || || || || |||||||||| |||| || Sbjct 127613 CGACATGAGGTTGTATGTCTCGATGACGCGGTCGATATCAGCTCCGTGTATGCCGACAGC 127672 Query 23848 GACGCGCATCATCATGTATTGAGGTCTCTC 23877 || ||||| ||||| | ||| || | ||| Sbjct 127673 CACACGCATGATCATATGTTGTGGGCGCTC 127702 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/214 (70%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 23353 CATA-AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| ||||| || || ||||| | |||||||||| || || || || || || | Sbjct 127126 CATACAAAAGGTCAGGGATCCACAATGCGTAGAACAAGTCACGAGCACGAGATTCTTCCT 127185 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 | ||| |||||| |||| || | |||||| || || || || ||||| |||||||||| Sbjct 127186 TCCCGTGGTTCTTCCTCAAGTCGAGAAAGTCGAAGACATCGGCGTGCCATGGCTCGAGGT 127245 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 | | ||||| ||||| || | ||| || || || || || || || || || ||| | Sbjct 127246 AGATAGCAAATGCGCCAGGGCGCTTGTTACCTCCTTGGTCAACATATCGAGCTGTGGCAT 127305 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| | | ||||| || || | ||||| || Sbjct 127306 CATACGCCCGAAGCATTGGTACAATGCCGTTCGA 127339 >seq190 Length=61660 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || ||||| |||| ||||| | || Sbjct 10173 CATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGTCCTC 10114 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || || ||||||||| || | || ||| |||| Sbjct 10113 GGACACCATCGATAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCAACCA 10054 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| |||||||| | || || ||| | || || || Sbjct 10053 GCAGCGTCTCATCTTCGCCGGCAAACAACTCGAGGATGGCCGTACTCTTTCTGACTACAA 9994 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || ||||| || ||||| || || Sbjct 9993 TATTCAGAAGGAGTCGACGCTCCATCTTGTCCT 9961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445752308209680