Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2043 105 1e-17 >seq2043 Length=178294 Score = 105 bits (116), Expect = 1e-17 Identities = 180/256 (70%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGC-CGCCTCCTTAAGAGTATCATAAATACC 94844 |||| || ||||| || ||| || || || | ||| |||| ||| || || || || Sbjct 127449 CCGATCCCACCAGCTGTTTTGCTAATCATAGCACAACTCTTTAA-AGTGTCGTAGATTCC 127507 Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTG 94903 || ||| || || | | || | | |||||||||| ||| || ||||| | | Sbjct 127508 ATCTATGGAGTCGTCCTTCATGCAGACCAAGAAGCACGAGCTAAGCTGTGGGTGGGGA-G 127566 Query 94904 TTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCAT 94963 | ||| ||| ||||| || || ||||| || || || || || ||||||||| | | Sbjct 127567 TACCAGCATTGAACAGAGTAGGAGAAGCGTGCGTGAAGTATCGCTCCGACATGAGGTTGT 127626 Query 94964 ATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCA 95023 |||| || ||||| | ||| || | |||||| |||||||||||||||||||| |||| Sbjct 127627 ATGTCTCGATGACGCGGTCGATATCAGCTCCGTGTATGCCGACAGCCACACGCATGATCA 127686 Query 95024 TGTCCTGAGGGCGCTC 95039 | | || |||||||| Sbjct 127687 TATGTTGTGGGCGCTC 127702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989551934695195