Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1750 156 5e-33 >seq1750 Length=1054334 Score = 156 bits (172), Expect = 5e-33 Identities = 378/568 (67%), Gaps = 6/568 (1%) Strand=Plus/Plus Query 33571 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAG 33630 |||||| | || ||||| ||| ||||| ||||| ||||||| || | || || | Sbjct 413636 TAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGG 413695 Query 33631 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATC 33690 | || || || || || | || |||||||| || ||||||||||| |||||||| |||| Sbjct 413696 AGAAGGTAAGGCCAGGTAGTAATCCACGCTTCTTGAGCCAAAATATTGAAGCGAACGATC 413755 Query 33691 CGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGC 33748 | |||||||| || || ||||| ||||| || |||| || | | | || | | Sbjct 413756 CAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTACAGCGAATGAAGATC 413815 Query 33749 G-CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 33807 | |||| | |||||| ||||||| || ||||| | || | ||| || || |||| Sbjct 413816 GTTTGTCTTCTATCCATCGGAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATGGTTT 413875 Query 33808 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 33867 | ||||||| || || | | |||||| ||||| | ||| ||||| || | | Sbjct 413876 CAATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGCA 413935 Query 33868 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 33927 | ||| | |||||||| || ||||| || || || |||||||||||||| | | Sbjct 413936 TAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGCG 413995 Query 33928 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCAT 33987 | || | | || ||||| | | || ||||| | | || ||||| || || |||| Sbjct 413996 CTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACAAGGTTCTCATTGACGATGCCAT 414055 Query 33988 CACTGGCTGCAAAAAACGCCA--ATACATGTTTTATAAAAT-ATTTTTCGTCTGGTGTTA 34044 | || || || || || | || | | | | ||| || ||||| | | | Sbjct 414056 CCGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAATC 414115 Query 34045 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 34104 | |||||| || | |||||||| | ||| | ||||| || |||||||| || | Sbjct 414116 GAAGATTCCAGTCCATCCAGTCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAGAAG 414175 Query 34105 CCTCTGCCTTTTTATACATATTCCAGAT 34132 ||| |||| || ||||| | ||| || Sbjct 414176 CCTGCGCCTGCTTGTACATCTGCCATAT 414203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629797689891120