Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1750 89.7 5e-13 >seq1750 Length=1054334 Score = 89.7 bits (98), Expect = 5e-13 Identities = 326/505 (65%), Gaps = 8/505 (2%) Strand=Plus/Plus Query 11651 CCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttt 11710 || || ||||||| || || ||||| || || || | || || | ||||| || || Sbjct 413668 CCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCACGCTTC 413727 Query 11711 tttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAAT 11770 || | ||||||||| | ||| || || |||||||||||||| ||||| || || || ||| Sbjct 413728 TTGAGCCAAAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAAT 413787 Query 11771 GCTACTACTCTTTCTCC--ATATACCTTG-TTGCTAGATATCCATTTTCTGGCCCAATCA 11827 || || | | | | | || | | | ||| ||||||| ||||| || Sbjct 413788 GCAACGAGGCGTACAGCGAATGAAGATCGTTTGTCTTCTATCCATCGGAGAGCCCATTCT 413847 Query 11828 GCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAAATGCATTTTTTCTATA 11887 || || | || | ||| || ||||| || || | |||| ||| ||| | Sbjct 413848 GCCTTTTGCTTGATACATGGTATGGTTTCAATGGCATCGAATAGGTGCTGGCGTTCATTC 413907 Query 11888 TTATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATA 11947 ||| | | ||| ||||| || | | | ||| | || ||||| ||||||||||| Sbjct 413908 GGCTCTTTGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCCATC 413967 Query 11948 GCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTT 12007 |||||| ||||| |||||||| || || |||| || || || | || | | Sbjct 413968 ATTATTTGGAATCCGTAGAAACAGCGCGCTTCTGCGACTTGGACTTCGCTTGAGAAGCGT 414027 Query 12008 TCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTT 12067 || | | |||||||| || || ||||| | || || || || || || | Sbjct 414028 TCAACAAGGTTCTCATTGACGATGCCATCCGACGCCGCGAAGAAGGCGAGGATGCGGGAG 414087 Query 12068 ATAAAGTATTTTTCGTCTTTAGTTAAT---TTATCCCAAT-CATCTAAATCTTTTGATAA 12123 || ||| || ||| || | |||||| || ||| | |||| | ||||| || | Sbjct 414088 ATGAAGAATCGTTCATCGTCGGTTAATCGAAGATTCCAGTCCATC-CAGTCTTTAGAGAG 414146 Query 12124 ATCTACTTCTTCAACGGTCCAAAAA 12148 ||| | ||||| |||||||||||| Sbjct 414147 ATCAATCTCTTCGACGGTCCAAAAA 414171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468509988759760