Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq2467 107 2e-18 seq2481 105 7e-18 seq2468 84.2 2e-11 >seq2467 Length=211848 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | |||||| || | || | ||| ||||| || || ||||| || || Sbjct 155868 CCGCCGCGAAGACGCAAGACAAGATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAG 155809 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || ||| |||| || || || ||||||||||| Sbjct 155808 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGAGGG 155749 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || |||| | || | ||||||| || ||| ||| Sbjct 155748 ATGCCCTCCTTGTCCTGGATCTTCGCCTTTACGTTGTCGATCGTGTCGGAGGACTCGACC 155689 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | |||||||| || | ||| || ||||| || ||||| Sbjct 155688 TCCAGGGTGATGGTCTTGCCAGTAAGCGTCTTCACGAAGATCTGCAT 155642 >seq2481 Length=1366164 Score = 105 bits (116), Expect = 7e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | ||| | ||| | |||||||| || || ||||| ||||| Sbjct 516600 GCCTCCGCGGAGACGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGA 516659 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| |||||||| || || || || |||| || || || ||||||||||| Sbjct 516660 AAGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAGG 516719 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| | || | ||| | | || | ||||||| || ||| | Sbjct 516720 AATTCCTTCCTTGTC-CTGAATCTTGGCTTTCACGTTATCGATGGTGTCGGAGGACTCGA 516778 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| | || | ||||||||| ||||| || || ||||| || |||||| Sbjct 516779 CCTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAGATCTGCATA 516828 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||||| || || ||||||||||| || || ||||| || || | ||| Sbjct 516397 TGAAGAGTAGATTCCTTCTGAATGTTATAGTCCGACAATGTGCGACCATCCTCCAACTGC 516456 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || ||||| | |||| |||||| || || || || || ||||| ||||| ||| ||| Sbjct 516457 TTTCCAGCGAAAATCAAACGTTGTTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTTT 516516 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | |||||||| | ||| ||||| | ||| | ||||| ||||| Sbjct 516517 GCCTTAACGTTGTCGATTGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTTCCGGTG 516576 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | || || || || || ||||| Sbjct 516577 AGGGTCTTGACAAAGATCTGCAT 516599 >seq2468 Length=587188 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||||| || ||||| || |||||||| || ||||||| |||| || ||| Sbjct 315082 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAAGGTGCGGCCATCCTCG 315141 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGC 139661 |||||||| ||||| |||| || || ||||||||||| || |||| Sbjct 315142 AGCTGTTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGGGGAATGC 315187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496048318176800