Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1750 102 8e-17 >seq1750 Length=1054334 Score = 102 bits (112), Expect = 8e-17 Identities = 237/352 (67%), Gaps = 8/352 (2%) Strand=Plus/Plus Query 13892 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951 |||||||||||||| || || || || || || || | || || | ||||| || || Sbjct 413667 GCCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCACGCTT 413726 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 || | ||||||||||| ||| || || || ||||||||||| ||||| || ||||| || Sbjct 413727 CTTGAGCCAAAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAA 413786 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071 || | | ||| | | || || | | ||||| ||||||| ||||||||| Sbjct 413787 TGCAACGAGGCGTACAGCGAATGAAGATCGTTTGTCTTCTATCCATCGGAGAGCCCATTC 413846 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATT--CCTTCTCT 14129 | |||| || ||| | || |||||||| |||| |||| | | | ||| | Sbjct 413847 TGCCTTTTGCTTGATACATGGTATGGTTTCAATGGCATCGAATAGGTGCTGGCGTTC-AT 413905 Query 14130 TTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCC 14189 | | ||| || || |||||||| || | ||| | || || ||||| |||||| Sbjct 413906 TCGGCTCTT-TGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCC 413964 Query 14190 ATAGCTATCTGAAAACCATAAAAGCATCTAGCTTC--CGACCATTGTACTTC 14239 || ||| || || || || || || | ||||| |||| ||| ||||| Sbjct 413965 ATCATTATTTGGAATCCGTAGAAACAGCGCGCTTCTGCGAC--TTGGACTTC 414014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479712834598600