Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1750 125 7e-24 >seq1750 Length=1054334 Score = 125 bits (138), Expect = 7e-24 Identities = 232/337 (69%), Gaps = 4/337 (1%) Strand=Plus/Plus Query 13680 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739 |||||||||||||| || || || || || || || | || || | ||||| || || Sbjct 413667 GCCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCACGCTT 413726 Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799 || | ||||||||||| |||||| ||||| ||||||||||| ||||| || ||||| || Sbjct 413727 CTTGAGCCAAAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAA 413786 Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859 || | || ||| | | || || | | ||||| | ||||||| ||||||||| Sbjct 413787 TGCAACGAGGCGTACAGCGAATGAAGATCGTTTGTCTTCTATCCATCGGAGAGCCCATTC 413846 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTT--CCTTCTCT 13917 | |||| || ||| | || ||||| || |||| ||||| || | | ||| | Sbjct 413847 TGCCTTTTGCTTGATACATGGTATGGTTTCAATGGCATCGAATAGGTGCTGGCGTTC-AT 413905 Query 13918 TTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCT 13977 | | ||| || || |||||||| || | ||| | || || ||||| ||||| Sbjct 413906 TCGGCTCTT-TGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCC 413964 Query 13978 ATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG 14014 || ||| || || || || ||||| | ||||||| Sbjct 413965 ATCATTATTTGGAATCCGTAGAAACAGCGCGCTTCTG 414001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478573670611560