Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1750 141 1e-28 >seq1750 Length=1054334 Score = 141 bits (156), Expect = 1e-28 Identities = 374/568 (66%), Gaps = 6/568 (1%) Strand=Plus/Plus Query 42054 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGG 42113 |||||| | || ||||| ||| ||||| ||||||||||||| || | || |||| Sbjct 413636 TAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGG 413695 Query 42114 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATC 42173 | || || || || || | || |||||||| || ||||||||||| || || || |||| Sbjct 413696 AGAAGGTAAGGCCAGGTAGTAATCCACGCTTCTTGAGCCAAAATATTGAAGCGAACGATC 413755 Query 42174 CAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--AT-AACCGG 42230 |||||||||| || || ||||| || || || |||| || | | | || || Sbjct 413756 CAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTACAGCGAATGAAGATC 413815 Query 42231 CACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 42290 |||| | |||||| ||||||| || ||||| | || | ||| || || |||| Sbjct 413816 GTTTGTCTTCTATCCATCGGAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATGGTTT 413875 Query 42291 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAA 42350 | ||||||| || || | | |||||| ||||| | ||| ||||| || | | Sbjct 413876 CAATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGCA 413935 Query 42351 GACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGG 42410 | ||| | || ||||| || ||||| || || || |||||||||||||| | | Sbjct 413936 TAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGCG 413995 Query 42411 CCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGT 42470 | || | || || ||||| | | || |||||| | | || || || || || || | Sbjct 413996 CTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACAAGGTTCTCATTGACGATGCCAT 414055 Query 42471 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT- 42529 | || || || || || | | | || || || ||| || |||||| Sbjct 414056 CCGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAATC 414115 Query 42530 --TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATG 42587 |||||| || | |||||||| | ||| | ||||| || |||||||| || | Sbjct 414116 GAAGATTCCAGTCCATCCAGTCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAGAAG 414175 Query 42588 CTTCTGCCTTTTTATACATATTCCAGAT 42615 | | |||| || ||||| | ||| || Sbjct 414176 CCTGCGCCTGCTTGTACATCTGCCATAT 414203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671117983612040