Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1750 172 8e-38 >seq1750 Length=1054334 Score = 172 bits (190), Expect = 8e-38 Identities = 372/549 (68%), Gaps = 12/549 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| |||| ||||| || |||||||| ||||||||| | ||||| Sbjct 414203 ATATGGCAGATGTACAAGCAGGCGCAGGCTTCTTTTTGGACCGTCGAAGAGATTGATCTC 414144 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || || ||| | || ||| | ||| || || || ||| ||| || || || Sbjct 414143 TCTAAAGACTGGATGGACTGGAATCTTCGATTAACCGACGATGAACGATTCTTCATCTCC 414084 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 | ||| | |||||||| || | || ||||| |||||||| || || || ||||| ||| Sbjct 414083 CGCATCCTCGCCTTCTTCGCGGCGTCGGATGGCATCGTCAATGAGAACCTTGTTGA-ACG 414025 Query 125198 ATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255 ||||| ||| | | ||| || |||| | | || || |||||||||||||| ||| Sbjct 414024 CTTCTC--AAGCGAAGTCCAAGTCGCAGAAGCGCGCTGTTTCTACGGATTCCAAATAATG 413967 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315 || || || | || ||||| | || |||| || ||||| | || || || ||| Sbjct 413966 ATGGAAAATATACATTCGGAGACCTATTCTATGCTCATTGATACCTATATCAAAGAGCCG 413907 Query 125316 ---CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 |||| | ||| || || | || || || || | || | ||| ||||| Sbjct 413906 AATGAACGCCAGCAC---CTATTCGATGCCATTGAAACCATACCATGTATCAAGCAAAAG 413850 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 || |||||| | || ||||| || ||| | ||||| | ||| | | || || Sbjct 413849 GCAGAATGGGCTCTCCGATGGATAGAAGACAAACGATCTTCATTCGCTGTACGCCTCGTT 413790 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 |||||||| |||||||||||||| |||||||| || || || | || ||||||||| Sbjct 413789 GCATTCGCTGCCGTAGAGGGCATATTCTTTTCTGGATCGTTCGCTTCAATATTTTGGCTC 413730 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| ||| | | || || || || | || ||| | || | | |||| ||| Sbjct 413729 AAGAAGCGTGGATTACTACCTGGCCTTACCTTCTCCAATGAGCTCATCTGTAGAGATGAG 413670 Query 125553 GGCCTACAC 125561 ||| | ||| Sbjct 413669 GGCATGCAC 413661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741035773266040