Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2481 134 3e-26 seq190 125 2e-23 seq2476 122 2e-22 seq1750 111 4e-19 >seq2481 Length=1366164 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || ||||| || || || ||||| ||||| | || ||||| ||||| || || Sbjct 516631 GTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCGAGTTGCTTGCCG 516690 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||||||||| ||||| |||||||| || ||||||||||| ||||| Sbjct 516691 GCGAAGATAAGGCGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTGAATCTTGGCTTTC 516750 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| | || ||||| || || || ||||| ||||| | || Sbjct 516751 ACGTTATCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATCGTCTTGCCAGTCAAAGTC 516810 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 516811 TTCACGAAGATCTGCAT 516827 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || ||||| || || || || || || | || || ||| Sbjct 516175 GTGGACTCCTTCTGGATGTTGTAATCAGAGAGCGTCCTGCCATCCTCCAACTGCTTGCCA 516234 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | | |||||| ||||| || || || || |||||||||||||| || || Sbjct 516235 GCAAAGATCAAGCGCTGTTGGTCAGGTGGGATCCCCTCCTTATCCTGAATCTTGGCCTTG 516294 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || | ||| || || || || || ||||| || || | || Sbjct 516295 ACATTGTCGATGGTGTCTGACGATTCAACTTCGAGGGTGATGGTCTTGCCCGTCAAAGTC 516354 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 516355 TTCACGAAGATTTGCAT 516371 >seq190 Length=61660 Score = 125 bits (138), Expect = 2e-23 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||||||||| |||||||| ||||| | || || Sbjct 9961 AGGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAAAGAGTACGGCCATCC 10020 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || |||||||| || || || || || | ||| || | ||||| || || || || ||| Sbjct 10021 TCGAGTTGTTTGCCGGCGAAGATGAGACGCTGCTGGTTGGGAGGGATACCCTCCTTGTCC 10080 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGT 104526 |||||||| || || ||||| || | ||| || | ||| || || || || || || || Sbjct 10081 TGAATCTTCGCCTTGACATTATCGATGGTGTC-CGAGGACTCAACTTCGAGAGTGATGGT 10139 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || || || || |||||||| Sbjct 10140 CTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 10172 >seq2476 Length=877278 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || |||||||| ||||| | ||||| || ||||| || || Sbjct 851218 GTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCG 851159 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | |||||| || ||||| || || || || ||||||||||| || || Sbjct 851158 GCGAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTG 851099 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| || | ||| ||||| || || || ||||| ||||| || || Sbjct 851098 ACGTTATCGATGGTGTCCGATGATTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTC 851039 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 851038 TTAACGAAGATCTGCAT 851022 >seq1750 Length=1054334 Score = 111 bits (122), Expect = 4e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 ||||| || |||||||| || ||||| ||||| || || || || ||| ||||||| ||| Sbjct 415823 GTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCAGGTTCATTCGCCTCTATCTTCTGG 415882 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 |||||||| | || |||||||| || | |||||||| ||||| | || || | ||| Sbjct 415883 TTGAAGAAGCGCGGTCTTATGCCTGGTCTTACTTTCTCCAACGAGCTCATCAGTCGTGAC 415942 Query 269258 GAAGGTTTACACTGCGACTTCGCTTG 269283 || || | ||| |||||||||||| Sbjct 415943 GAGGGCATGCACACCGACTTCGCTTG 415968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151361091453532