Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq2468 87.8 9e-13 seq1956 87.8 9e-13 seq1781 87.8 9e-13 >seq2468 Length=587188 Score = 87.8 bits (96), Expect = 9e-13 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||| | | |||||||||| |||||||||||||||||||||||||||| |||| Sbjct 94772 TTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAG 94713 Query 11515 CTGAGCTAATGGGCCGTCGA 11534 |||||||| | ||||| ||| Sbjct 94712 CTGAGCTAGTCGGCCGACGA 94693 >seq1956 Length=210924 Score = 87.8 bits (96), Expect = 9e-13 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 63369 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 63428 Query 11528 CCGTCGA 11534 ||| ||| Sbjct 63429 CCGACGA 63435 >seq1781 Length=306110 Score = 87.8 bits (96), Expect = 9e-13 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 ||||||| | | |||||||||| |||||||||||||||||||||||||||| |||| Sbjct 122293 ATTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCA 122234 Query 11514 ACTGAGCTAATGGGCCG 11530 |||||||| | ||||| Sbjct 122233 GCTGAGCTAGTCGGCCG 122217 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 144757 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 144698 Query 11528 CCG 11530 ||| Sbjct 144697 CCG 144695 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 146029 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 145970 Query 11528 CCG 11530 ||| Sbjct 145969 CCG 145967 Lambda K H 0.639 0.410 0.922 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261483140269204