Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2467 105 6e-18 seq2481 104 2e-17 seq190 91.5 1e-13 >seq2467 Length=211848 Score = 105 bits (116), Expect = 6e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || ||| ||||||| | | || ||||| ||||| || || || ||| Sbjct 155796 TCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGAGGGATGCCCTCCTTG 155737 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | ||| ||||| | | ||||| || | |||||| Sbjct 155736 TCCTGGATCTTCGCCTTTACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAGGGTGATG 155677 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 || || |||||||| || ||||| |||||||||||||| Sbjct 155676 GTCTTGCCAGTAAGCGTCTTCACGAAGATCTGCATGCT 155639 >seq2481 Length=1366164 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869 |||||||||||| || | |||||| || || ||| |||||||| ||| ||||| Sbjct 516402 AGTAGATTCCTTCTGAATGTTATAGTCCGACAATGTGCGACCATCCTCCAACTGCTTTCC 516461 Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929 | || || || | ||| || || || ||||| ||||| ||||| | || |||||||| Sbjct 516462 AGCGAAAATCAAACGTTGTTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTTTGCCTT 516521 Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 ||| | ||| ||||| | || || || | ||||| || ||||| || || || Sbjct 516522 AACGTTGTCGATTGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTTCCGGTGAGGGT 516581 Query 94990 TTTCACAAAGATCTGCATGC 95009 || |||||||||||||||| Sbjct 516582 CTTGACAAAGATCTGCATGC 516601 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | |||||| ||||| || | ||| ||||| | |||| | ||| || || || Sbjct 516624 GTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCGAGTTG 516683 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || ||| | ||||| | | || ||||| |||||||| ||||| ||||| | ||| || Sbjct 516684 CTTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTGAATCTT 516743 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 || || ||| ||| ||||| | | ||||| || | ||||| || || ||||| Sbjct 516744 GGCTTTCACGTTATCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATCGTCTTGCCAGT 516803 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 | ||| ||||| ||||||||||| Sbjct 516804 CAAAGTCTTCACGAAGATCTGCAT 516827 >seq190 Length=61660 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| || ||||| ||| | ||||| | | ||||| | ||||| ||||| || || Sbjct 10017 ATCCTCGAGTTGTTTGCCGGCGAAGATGAGACGCTGCTGGTTGGGAGGGATACCCTCCTT 10076 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||| || |||||||| ||| ||||| | | || || || | ||||| Sbjct 10077 GTCCTGAATCTTCGCCTTGACATTATCGATGGTGTCCGAGGACTCAACTTCGAGAGTGAT 10136 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||| || ||||| || || ||||| ||||||||||||| Sbjct 10137 GGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATGC 10174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448277028394440