Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2455 118 2e-22 seq1792 109 9e-20 >seq2455 Length=549447 Score = 118 bits (130), Expect = 2e-22 Identities = 112/142 (79%), Gaps = 1/142 (1%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 |||||||||||||| |||||||||||||| ||||||||| | ||||| ||| ||||||| Sbjct 246433 GCTATCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGGCTTGATCTATGAG 246374 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 |||| ||||| ||| ||||||| ||| | ||| || || | ||| || || || Sbjct 246373 GAGACTCGTGGTGTCCTGAAGATTTTCTTGGAGAATGTCATTCGTGACTCTGTCACTTAC 246314 Query 16607 ACCGAGCACGCTAAAC-GTAAG 16627 ||||||||||| || | ||||| Sbjct 246313 ACCGAGCACGCCAAGCGGTAAG 246292 >seq1792 Length=300150 Score = 109 bits (120), Expect = 9e-20 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| |||||||||||||| ||||| ||||| ||||| || || |||||| |||| Sbjct 288819 AGGTATCACAAAGCCAGCTATCCGCCGTCTTGCTCGCCGTGGAGGTGTGAAGCGTATCTC 288878 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 || ||| |||| || |||| |||| ||| | || || ||||| ||| ||| |||| Sbjct 288879 CGGCTTGATCTACGAGGAGACCCGTGGTGTCCTCAAAATTTTCCTTGAGAACGTCATCCG 288938 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 ||| | || ||| || || |||||||| || Sbjct 288939 TGACTCGGTCACCTACACTGAACACGCTAAGCG 288971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072887717597