Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1750 129 6e-25 >seq1750 Length=1054334 Score = 129 bits (142), Expect = 6e-25 Identities = 262/395 (66%), Gaps = 0/395 (0%) Strand=Plus/Plus Query 21491 TGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCT 21550 |||| || ||||| |||| || | ||||| || || || | || || | |||||| Sbjct 413662 TGCATGCCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCA 413721 Query 21551 CTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCA 21610 | ||| || | |||||||||||| || || | ||| |||||||| |||||||| |||||| Sbjct 413722 CGCTTCTTGAGCCAAAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCA 413781 Query 21611 GCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCC 21670 || |||||||| | ||| || || ||| |||| ||| || ||||||| ||| Sbjct 413782 GCGAATGCAACGAGGCGTACAGCGAATGAAGATCGTTTGTCTTCTATCCATCGGAGAGCC 413841 Query 21671 CATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAAGATGAtttttt 21730 |||| |||||||| || ||||| || || ||||| || | || || || | | Sbjct 413842 CATTCTGCCTTTTGCTTGATACATGGTATGGTTTCAATGGCATCGAATAGGTGCTGGCGT 413901 Query 21731 tCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAATGTATATTT 21790 |||| || | || | ||| | || |||||||||||| Sbjct 413902 TCATTCGGCTCTTTGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATTT 413961 Query 21791 TCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACCTCGGAATAA 21850 || ||| ||| || |||||||| ||||| | || |||| ||| || ||| | Sbjct 413962 TCCATCATTATTTGGAATCCGTAGAAACAGCGCGCTTCTGCGACTTGGACTTCGCTTGAG 414021 Query 21851 AATCGTTGAGCCAAGTTTTCATTTACTATTCCATC 21885 || |||| | | | ||| ||||| || || ||||| Sbjct 414022 AAGCGTTCAACAAGGTTCTCATTGACGATGCCATC 414056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531883985285960