Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1750 131 4e-25 seq2043 84.2 6e-11 >seq1750 Length=1054334 Score = 131 bits (144), Expect = 4e-25 Identities = 254/372 (68%), Gaps = 11/372 (3%) Strand=Plus/Minus Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338 ||| | ||| | |||| || | |||||||| || | ||||| ||||| |||||| | Sbjct 414014 GAAGTCCAAGTCGCAGAAGCGCGCTGTTTCTACGGATTCCAAATAATGATGGAAAATATA 413955 Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAAC-AACG 22397 || |||| || ||||||||| | || | | | || | | | || |||| |||| Sbjct 413954 CATTCGGAGACCTATTCTATGCT----CATTGATACCTATATCAAAGAGCCGAATGAACG 413899 Query 22398 AAA---CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGC 22454 | | ||||| || ||| ||||| | || || ||| | |||||||| ||||| Sbjct 413898 CCAGCACCTATTCGATGCCATTGAAACCATACCATGTATCAAGCAAAAGGCAGAATGGGC 413839 Query 22455 GCTGAAATGGATGAACAATGAACG---TTCATTCGCGGAACGTCTTATTGCATTTGCTGT 22511 || |||||| | | |||| ||||||||| | ||| || ||||||| |||| Sbjct 413838 TCTCCGATGGATAGAAGACAAACGATCTTCATTCGCTGTACGCCTCGTTGCATTCGCTGC 413779 Query 22512 GGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGC 22571 || || ||||| |||||||||||| | || | |||| |||||||| || || |||| Sbjct 413778 CGTAGAGGGCATATTCTTTTCTGGATCGTTCGCTTCAATATTTTGGCTCAAGAAGCGTGG 413719 Query 22572 AATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATAC 22631 | | | || || || || || || |||||| | || | |||||||||| | || || Sbjct 413718 ATTACTACCTGGCCTTACCTTCTCCAATGAGCTCATCTGTAGAGATGAGGGCATGCACAC 413659 Query 22632 CGATTTTGCGTG 22643 ||| || || || Sbjct 413658 CGAATTCGCTTG 413647 >seq2043 Length=178294 Score = 84.2 bits (92), Expect = 6e-11 Identities = 193/289 (67%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 363415 TCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGT 363474 || ||||| ||| |||||||| ||| || ||||| || |||||| | |||||| Sbjct 127735 TCTTACCTCCTTCGCATCAATGGACGCGTTGCGGAGCGCCCACAACATATGATCATGCGT 127676 Query 363475 GTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG--ATTGAAACATATAAGCTTC 363532 || ||| | || || || | | ||| | || ||||| || || ||||| || || Sbjct 127675 GTGGCTGTCGGCATACACGGAGCTGATATCGA--CCGCGTCATCGAGACATACAACCTCA 127618 Query 363533 TAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATC 363592 | | || ||||||||||| | || || ||| ||||||||| |||| | | Sbjct 127617 TGTCGGAGCGATACTTCACGCACGCTTCTCCTACTCTGTTCAATGCTGGTACTCCCCACC 127558 Query 363593 CACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTG 363652 ||||| | || ||||| | | ||||||||||| ||||| || || |||| | Sbjct 127557 CACAGCTTAGCTCGTGCTTCTTGGTCTGCATGAAGGACGACTCCATAGATGGAATCTACG 127498 Query 363653 ACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGG 363701 |||| | |||| ||||||| | ||| ||| | || || || || || Sbjct 127497 ACACTTTAAAGAGTTGTGCTATGATTAGCAAAACAGCTGGTGGGATCGG 127449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303311367677678