Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq2476 105 4e-18 seq719 93.3 3e-14 seq190 87.8 1e-12 seq2481 84.2 1e-11 >seq2476 Length=877278 Score = 105 bits (116), Expect = 4e-18 Identities = 213/313 (68%), Gaps = 10/313 (3%) Strand=Plus/Plus Query 6183 CGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTG--CGCCAAGGTCG 6240 ||| |||| | ||| |||||||||||| |||| | | |||| | ||||| ||| Sbjct 418100 CGTGATGTCGACGACAAATTCTACCGCTACCGCATGC--CCCTTCTGACCACCAAGATCG 418157 Query 6241 AGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGC 6300 |||| || |||||||| || || || ||||| ||||||| |||| ||||| || | Sbjct 418158 AGGGCAAAGGAAACGGCATCAAGACGGTCATCCCCAACATGTCTGATGTCGCGCGCGCCC 418217 Query 6301 TCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGC 6360 | | || || | || ||| | || || | ||||| |||||||| || || |||||| Sbjct 418218 TTAGCCGTCCCCCGACGTACACAACCAAGTTCTTCGGCTGCGAACTCGGAGCGCAGACGT 418277 Query 6361 AGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAA---GC 6417 || || | || ||||| |||| |||||| ||||| | || || ||||| | Sbjct 418278 CCTTCGACGAGAAGAACGACCGCTACATCGTCAACGGCGCCCACGAC---GCCAACCGTC 418334 Query 6418 TGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACC 6477 | | || | || |||| ||| || ||| || ||||| || | ||| | |||| Sbjct 418335 TTCGCGAGCTCCTGGACGTCTTCATCGACAAATTCGTGCTCTGCAAAGCGTGCAAGAACC 418394 Query 6478 CGGAGACCGAGCT 6490 | ||||| ||||| Sbjct 418395 CCGAGACTGAGCT 418407 >seq719 Length=453660 Score = 93.3 bits (102), Expect = 3e-14 Identities = 197/293 (67%), Gaps = 6/293 (2%) Strand=Plus/Plus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 ||||||||||| |||||| | || | |||| | ||||| || |||||||| ||| Sbjct 199355 TTCTACCGCTATCGAATGCCCCTTCTCACCACCAAAATTGAGGGGAAAGGAAACGGCATT 199414 Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320 || || || | || ||| |||| |||||| || ||| | || ||| | || || Sbjct 199415 AAGACAGTGGTCCCGAATATGTCTGACGTCGCTCGCGCTCTCAGCCGACCTCCGACTTAT 199474 Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 | || || | |||||||||||||| || ||||| || || || | || || || Sbjct 199475 ACTACCAAGTTCTTCGGGTGCGAACTCGGAGCTCAAACCTCCTTCGACGAAAAGAATGAT 199534 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAA---GCTGCAGGACTTACTTGACGGC 6437 |||| ||||||||| || | || || || || || | || | ||||| | Sbjct 199535 CGCTACATCGTTAATGGTGCCCACGAC---GCAAATCGCCTCCGTGAACTGCTTGATGTT 199591 Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490 || || |||||| || || || || |||| | ||||| ||||||||||| Sbjct 199592 TTCATCGACAAGTTCGTTCTCTGCAAGGCATGCAAGAACCCTGAGACCGAGCT 199644 >seq190 Length=61660 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 38126 CTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAA 38185 |||||| ||||||||||| ||||| | | ||| | || || | |||||| ||||| || Sbjct 9981 CTCCTTCTGAATATTGTAGTCAGAAAGAGTACGGCCATCCTCGAGTTGTTTGCCGGCGAA 10040 Query 38186 TATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 || || || || || | || |||| || || |||||| ||| || ||| ||||| Sbjct 10041 GATGAGACGCTGCTGGTTGGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACATT 10100 Query 38246 CTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305 | || || || |||||||| | || || || || || || | ||| ||||| Sbjct 10101 ATCGATGGTGTCCGAGGACTCAACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCAC 10160 Query 38306 GAATATCTGCATG 38318 ||| ||||||||| Sbjct 10161 GAAGATCTGCATG 10173 >seq2481 Length=1366164 Score = 84.2 bits (92), Expect = 1e-11 Identities = 146/211 (69%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 38108 CACCAAA-TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGT 38166 |||||| || |||||| |||||| || || ||||||||||| | | | || | Sbjct 516161 CACCAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGCGTCCTGCCATCCT 516220 Query 38167 CTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCA 38226 | || || || || ||||| || | ||| ||||| || | |||| || || || ||| Sbjct 516221 CCAACTGCTTGCCAGCAAAGATCAAGCGCTGTTGGTCAGGTGGGATCCCCTCCTTATCCT 516280 Query 38227 TAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTT 38286 ||| || ||| ||||| | || || ||| ||||||||| | || || || | Sbjct 516281 GAATCTTGGCCTTGACATTGTCGATGGTGTCTGACGATTCAACTTCGAGGGTGATGGTCT 516340 Query 38287 TACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||||||| || |||||||| || ||||| Sbjct 516341 TGCCCGTCAAAGTCTTCACGAAGATTTGCAT 516371 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 || ||||| |||||| || || ||||||||||| | | || | || || | ||| Sbjct 516625 TGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCGAGTTGC 516684 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || ||||| || || ||||| |||||||||| || | ||||| |||||| ||| || Sbjct 516685 TTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTGAATCTTG 516744 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||||| || | || || || || || || | || || || || || ||| Sbjct 516745 GCTTTCACGTTATCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATCGTCTTGCCAGTC 516804 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 || || |||||||| |||||||| Sbjct 516805 AAAGTCTTCACGAAGATCTGCAT 516827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334936876194599