Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1750 138 1e-27 >seq1750 Length=1054334 Score = 138 bits (152), Expect = 1e-27 Identities = 374/568 (66%), Gaps = 6/568 (1%) Strand=Plus/Plus Query 32650 TAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGG 32709 |||||| | || ||||| ||| ||| | ||||| ||||||| || | || |||| Sbjct 413636 TAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGG 413695 Query 32710 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATC 32769 | || || || || || | || |||||||| || ||||||||||| || || || |||| Sbjct 413696 AGAAGGTAAGGCCAGGTAGTAATCCACGCTTCTTGAGCCAAAATATTGAAGCGAACGATC 413755 Query 32770 CAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGC 32827 |||||||||| || || ||||| || || || |||| || | | | || | | Sbjct 413756 CAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTACAGCGAATGAAGATC 413815 Query 32828 G-CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 32886 | |||| | |||||| ||||||| || ||||| | || | ||| || || || | Sbjct 413816 GTTTGTCTTCTATCCATCGGAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATGGTTT 413875 Query 32887 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 32946 | || |||| || || | | |||||| ||||| | ||| |||||||| | | Sbjct 413876 CAATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGCA 413935 Query 32947 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAG 33006 | ||| | |||||||| || ||||| || ||||| ||||||||||| || | | Sbjct 413936 TAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGCG 413995 Query 33007 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 33066 | || | | || ||||| | | || ||||| | | || ||||| || || || | Sbjct 413996 CTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACAAGGTTCTCATTGACGATGCCAT 414055 Query 33067 CACTGGCTGCAAAAAACGCCA--ATACATGTTTTATAAAAT-ATTTTTCGTCTGGTGTTA 33123 | || || || || || | || | | | | ||| || ||||| | | | Sbjct 414056 CCGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAATC 414115 Query 33124 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 33183 | |||||| || | |||||||| | ||| | ||||| || |||||||| || | Sbjct 414116 GAAGATTCCAGTCCATCCAGTCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAGAAG 414175 Query 33184 CCTCTGCCTTTTTATACATATTCCAGAT 33211 ||| |||| || ||||| | ||| || Sbjct 414176 CCTGCGCCTGCTTGTACATCTGCCATAT 414203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633611969308400