Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2481 122 8e-23 seq190 100 2e-16 seq2476 89.7 4e-13 >seq2481 Length=1366164 Score = 122 bits (134), Expect = 8e-23 Identities = 153/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| || || | ||||| |||| || ||||| || Sbjct 516827 ATGCAGATCTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAGGTCGAGTCCTCC 516768 Query 25059 GACACTATCGAGTCAC-TG-AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || || |||| || | ||| ||||| ||||| ||||| || || | Sbjct 516767 GACACCATCGA-TAACGTGAAAGCCAAGATTCA-GGACAAGGAAGGAATTCCTCCCGATC 516710 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| |||| || |||||||| ||| | ||||||| |||||| | ||||||| Sbjct 516709 AACAGCGCCTTATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACTCTTTCTGATTACA 516650 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | || || || || || || || || Sbjct 516649 ACATCCAGAAGGAGTCTACTCTCCA 516625 Score = 116 bits (128), Expect = 3e-21 Identities = 151/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| || || ||||||| ||||||| || ||||| Sbjct 516371 ATGCAAATCTTCGTGAAGACTTTGACGGGCAAGACCATCACCCTCGAAGTTGAATCGTCA 516312 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || | || || | ||| || || || ||||| ||||||||| Sbjct 516311 GACACCATCGA--CAATGTCAAGGCCAAGATTCA-GGATAAGGAGGGGATCCCACCTGAC 516255 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || ||||| ||||| || || || |||| | || | |||||| Sbjct 516254 CAACAGCGCTTGATCTTTGCTGGCAAGCAGTTGGAGGATGGCAGGACGCTCTCTGATTAC 516195 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 || || || || || ||||| || || Sbjct 516194 AACATCCAGAAGGAGTCCACTCTGCA 516169 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| || | ||||| |||| || ||||| || Sbjct 516599 ATGCAGATCTTTGTCAAGACCCTCACCGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 516540 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| ||| ||| ||||| ||||| ||||||||||||||| Sbjct 516539 GACACAATCGACAACGTTAAGGCAAAGATCCAAGACAAGGAAGGAATTCCACCTGACCAA 516480 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | ||||| || || || || || || |||| |||||| || || || || Sbjct 516479 CAACGTTTGATTTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACATTGTCGGACTATAAC 516420 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || ||||| || || ||| | || || Sbjct 516419 ATTCAGAAGGAATCTACTCTTCATCTCGTCCT 516388 >seq190 Length=61660 Score = 100 bits (110), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| ||||||| ||||| || Sbjct 10172 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGTCCTCG 10113 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| | || || | ||| ||||| || || || || || | Sbjct 10112 GACACCATCGATAATGTCA---AGGCGAAGATTCAG-GACAAGGAGGGTATCCCTCCCAA 10057 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| | || || |||||||||||| | || |||| || ||| | || || Sbjct 10056 CCAGCAGCGTCTCATCTTCGCCGGCAAACAACTCGAGGATGGCCGTACTCTTTCTGACTA 9997 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||| || || || ||||| ||| | || || Sbjct 9996 CAATATTCAGAAGGAGTCGACGCTCCATCTTGTCCT 9961 >seq2476 Length=877278 Score = 89.7 bits (98), Expect = 4e-13 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| || || ||||||| |||| || || || || Sbjct 851022 ATGCAGATCTTCGTTAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTCGAATCATCG 851081 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || | ||| | || | ||| ||||| || || || || || |||| Sbjct 851082 GACACCATCGA-TAACGTCAAGGCGAAGATTCAG-GACAAGGAGGGCATCCCTCCCGACC 851139 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || |||||||| ||| | || || | |||||| | || |||| Sbjct 851140 AACAGCGCCTCATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCTGACTACA 851199 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | || || || || || ||||| || Sbjct 851200 ACATCCAGAAGGAGTCGACGCTCCA 851224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433314643883135