Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1750 217 2e-51 >seq1750 Length=1054334 Score = 217 bits (240), Expect = 2e-51 Identities = 392/566 (69%), Gaps = 19/566 (3%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || |||||||| || | || ||||| || || | ||| ||| ||| || | Sbjct 415969 GCAAGCGAAGTCGGTGTGCATGCCCTCGTCACGACTGATGAGCTCGTTGGAGAAAGTAAG 415910 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||| | ||| || || || || || ||| || || || Sbjct 415909 ACCAGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGAGGCGAATGAACCTGAGAAGAA 415850 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-- 93268 ||||| || || || || || || || | ||| || ||||| | | ||| ||| Sbjct 415849 GATACCCTCGACAGCGGCGAAGGCAACGAGACGCTCAGCAAATGTCG----ATTGCTGGT 415794 Query 93269 CTGA--TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAG 93326 |||| ||||| | |||||| ||||| || ||| ||||| || | |||||||||| Sbjct 415793 CTGAAATCCATCGAAGAGCCCACTCGGCCTTGCGCTTGATACAGGGGATAGTTTCGATAG 415734 Query 93327 CGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGT--ATGTATGTATCGATTAACAGAGA 93384 ||| ||| ||||| || |||||| | ||| || | ||||| || ||||| |||| || Sbjct 415733 CGTCAAAGAGGTAGTCGCGCTCGGC--AATATCCTTGATGTAGGTGTCGATCAACAATGA 415676 Query 93385 ATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTC 93444 ||| | ||||| |||| |||||||| || ||||| |||||||| || | ||| || Sbjct 415675 ATAGGTCTCAGAGTGGATGTTCTCCATCATTATCTGGAAACCGTAGAAGCAGCGAGCCTC 415616 Query 93445 CGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGA 93504 | || |||||||| | || || | || ||||| ||||| ||||| || ||||| || Sbjct 415615 AGCGACTTGCACTTCGTTCGAGAAACGTTCGACGAGGTTTTCGTTGACAATGCCATCCGA 415556 Query 93505 TGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTAT- 93563 || || || ||||| | | || || || || ||| |||| || ||||| | Sbjct 415555 AGCGGCGAAGAAAGCGAGAACGTGAGAGATGAAGTGACGCTCGCCATCGTTCAGCTTGTT 415496 Query 93564 --CCCAATC--GGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCT 93619 ||| || |||| |||||| |||||||| | || || ||||||| || || || Sbjct 415495 TGTCCAGTCATGGAT--ATCTTTGGAAAGATCCATCTCCTCAGCAGTCCAGAAGGAAGCC 415438 Query 93620 TCTGCTTTTTTGTACATATCCCATAT 93645 || ||||| |||||||| | |||||| Sbjct 415437 TCAGCTTTCTTGTACATTTGCCATAT 415412 Score = 187 bits (206), Expect = 3e-42 Identities = 386/565 (68%), Gaps = 17/565 (3%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || || ||||| || | || || |||| | || | ||||||| ||| || | Sbjct 413646 GCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAG 413705 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || |||| | ||| || ||||||||||||||||||||||| || |||||||| || Sbjct 413706 GCCAGGTAGTAATCCACGCTTCTTGAGCCAAAATATTGAAGCGAACGATCCAGAAAAGAA 413765 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAA----TTAC 93266 ||| || || ||||| || ||||| || | ||| | || || || || | | Sbjct 413766 TATGCCCTCTACGGCAGCGAATGCAACGAGGCGTACAGCGAA---TGAAGATCGTTTGTC 413822 Query 93267 TGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAG 93326 | || |||||| | |||||| || || |||| ||| ||||| |||| ||||| || | Sbjct 413823 TTCT-ATCCATCGGAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATGGTTTCAATGG 413881 Query 93327 CGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386 | | ||||||| | || || | || ||| || || ||||| || | || ||||| Sbjct 413882 CATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGCATAGAAT 413941 Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446 | | || ||||| | ||| ||||| |||||||||||||||||||| | ||||| | Sbjct 413942 AGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGCGCTTCTG 414001 Query 93447 TGATCTGCACTT--CTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGA 93504 || || |||| |||||| || | || || || || |||||||| || ||||| || Sbjct 414002 CGACTTGGACTTCGCTTGAG--AAGCGTTCAACAAGGTTCTCATTGACGATGCCATCCGA 414059 Query 93505 TGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAA--GCTT 93561 || || || || || | || | || || | ||||| || |||| | Sbjct 414060 CGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAATCGAAG 414119 Query 93562 ATCCCAATCGGATAGA-TCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTT 93620 || ||| || || | ||||| || ||||| | |||||||| |||||||| || || | Sbjct 414120 ATTCCAGTC-CATCCAGTCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAGAAGCCT 414178 Query 93621 CTGCTTTTTTGTACATATCCCATAT 93645 || | |||||||| | |||||| Sbjct 414179 GCGCCTGCTTGTACATCTGCCATAT 414203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556843196237960